Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is adeC
Identifier: 15889568
GI number: 15889568
Start: 2266028
End: 2267755
Strand: Direct
Name: adeC
Synonym: Atu2292
Alternate gene names: 15889568
Gene position: 2266028-2267755 (Clockwise)
Preceding gene: 159185143
Following gene: 159185147
Centisome position: 79.75
GC content: 58.8
Gene sequence:
>1728_bases ATGGCAATAATACCAGGAGTCGAACAGAAGCCCATGAGTTCCAATTTAGAATCACGCATCGATCAGGGTACCGGCCGTGA ACCGGCAGATATGGTTCTGAAGGGCGGGCGTTTTTTCGATCTTGTCACCGGGGAACTTGTTGCTTCGGACATTGCTATTT GCGGCGATACTGTCGTTGGCACATGTGGAGACTACAAGGGTCGGCATGAAATCGATATTTCCGGAAAAATCGTCGTTCCC GGCTTCATCGATACACATCTCCATATCGAATCCTCGCTCGTTACACCGCATGAATTCGACCGCTGCGTTCTGCCCTATGG TGTCACCACCGCCATCTGTGACCCGCACGAGATTGCCAATGTGCTGGGCGCGGAAGGGCTTCAGTTCTTCCTCGACAGCG CCATGGAAACCATCATGGACATCCGCGTGCAGCTCTCCTCCTGCGTGCCCGCCACCCATCTGGAAACATCAGGCGCCGAT CTACCGATCGAAAAGCTGCTGCCGTTCCGAAATCATCCGAAGGTCATCGGGCTTGCCGAATTCATGAATTTCCCGGGTGT CATCCACAAGGACCCGGTGTGCATGGCAAAGCTGGAGGCCTTTCAGGGCCAGCATATCGATGGTCACGCACCGCTTCTGT CGGGAGCGGCGCTCAACGGTTATCTCGCCGCCGGCATCCGTACCGAACATGAATGCACGAGCGCCGCTGAGGCGCTGGAG AAAATCCGTAAGGGCATGCATATTCTGGTACGCGAAGGTTCGGTCTCGAAGGACCTGCATGCGCTGATGCCTATCATCAC CGAACGCCTGTCACCCTATCTGGCGCTCTGCACCGATGATCGCAATCCGCTCGATATCGCCGAACAGGGCCATCTGGACT ATATGATCCGCACGGCGATCGCCAGCGGCGTGGAACCGCTCGCCATCTATCGAGCCGCCTCGATTTCCGCTGCTAAAGCC TTCGGTCTTCGTGATCGCGGTCTTGTCGCCCCCGGCTGGCGCGCCGATCTCGTGGTCATCGACACCCTGCAGAACTGTAA GGCGAGCATGGTGCTTTCCGGCGGCCGCCTGGTCGATGACGCCCTGTTTGCCACCCGCAAACCGGTGGCACCCGTCGGTC TCGACAGCGTCAAGGCCAGACCGGTGCTTGCCTCCCATTTCGGTGTGCCGGTCACGGAGGGCGAAACCCCAGTCATGGGC GTGCTTCCCGGCAAGATCATCACCGAACATCGCCGCTACAAGCTGCCGACGGATGGCAACCAGACCACCGTCGATCTCGA AAACGACATCATCAAGGTTGCCGTCATCGAACGTCATGGCAAGAACGGCAATCATGCCAATGGTTTCGTCCAGGGCTTCG GACTGAAAAAGGGCGCCATCGCCTCCACCGTCGGCCATGACAGCCATAATATCTGCGTCGTCGGCGTGAGCGAAGACGAC ATGGCGCTGGCCGCCAACCGGCTCGGAGACATCAAGGGTGGTTTCGTGGTGGTGGAAGACGGCCGGGTGACGGGCGAAAT CGCGCTCCCCGTCGCCGGGCTTATGAGCCTCGAACCTTACGAGACGGTACGCGACACGCTGCACACCCTGCGCAAGGCCG CCTACGCACTCGGCACCACGCTGGAAGAACCCTTCCTGCAGGTCGCCTTCCTGCCGCTGCCCGTCATTCCGCATTTGAAG ATTTCGGATATGGGTATGGTGGATGTGGATCGGTTTGCGCTGATTTGA
Upstream 100 bases:
>100_bases GAATATGAAAATTTTTTACTATAGCTATATTTAAAAACCACGAAAACGCGAAGAAATAGGCTGAAAACAACCCAAGAATG CAAATGAAAGAAAATATCGC
Downstream 100 bases:
>100_bases TTGCGCAGCGTATATCGCCGCACGCGGCGGAGACGTCTAGAGCATTTCGAGGAAAGTGGATCCCGGTCTTCCGGCCGAAA ATGCTCCAACCGTCTTCGCA
Product: adenine deaminase
Products: NA
Alternate protein names: Adenase 1; Adenine aminase 1
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MAIIPGVEQKPMSSNLESRIDQGTGREPADMVLKGGRFFDLVTGELVASDIAICGDTVVGTCGDYKGRHEIDISGKIVVP GFIDTHLHIESSLVTPHEFDRCVLPYGVTTAICDPHEIANVLGAEGLQFFLDSAMETIMDIRVQLSSCVPATHLETSGAD LPIEKLLPFRNHPKVIGLAEFMNFPGVIHKDPVCMAKLEAFQGQHIDGHAPLLSGAALNGYLAAGIRTEHECTSAAEALE KIRKGMHILVREGSVSKDLHALMPIITERLSPYLALCTDDRNPLDIAEQGHLDYMIRTAIASGVEPLAIYRAASISAAKA FGLRDRGLVAPGWRADLVVIDTLQNCKASMVLSGGRLVDDALFATRKPVAPVGLDSVKARPVLASHFGVPVTEGETPVMG VLPGKIITEHRRYKLPTDGNQTTVDLENDIIKVAVIERHGKNGNHANGFVQGFGLKKGAIASTVGHDSHNICVVGVSEDD MALAANRLGDIKGGFVVVEDGRVTGEIALPVAGLMSLEPYETVRDTLHTLRKAAYALGTTLEEPFLQVAFLPLPVIPHLK ISDMGMVDVDRFALI
Sequences:
>Translated_575_residues MAIIPGVEQKPMSSNLESRIDQGTGREPADMVLKGGRFFDLVTGELVASDIAICGDTVVGTCGDYKGRHEIDISGKIVVP GFIDTHLHIESSLVTPHEFDRCVLPYGVTTAICDPHEIANVLGAEGLQFFLDSAMETIMDIRVQLSSCVPATHLETSGAD LPIEKLLPFRNHPKVIGLAEFMNFPGVIHKDPVCMAKLEAFQGQHIDGHAPLLSGAALNGYLAAGIRTEHECTSAAEALE KIRKGMHILVREGSVSKDLHALMPIITERLSPYLALCTDDRNPLDIAEQGHLDYMIRTAIASGVEPLAIYRAASISAAKA FGLRDRGLVAPGWRADLVVIDTLQNCKASMVLSGGRLVDDALFATRKPVAPVGLDSVKARPVLASHFGVPVTEGETPVMG VLPGKIITEHRRYKLPTDGNQTTVDLENDIIKVAVIERHGKNGNHANGFVQGFGLKKGAIASTVGHDSHNICVVGVSEDD MALAANRLGDIKGGFVVVEDGRVTGEIALPVAGLMSLEPYETVRDTLHTLRKAAYALGTTLEEPFLQVAFLPLPVIPHLK ISDMGMVDVDRFALI >Mature_574_residues AIIPGVEQKPMSSNLESRIDQGTGREPADMVLKGGRFFDLVTGELVASDIAICGDTVVGTCGDYKGRHEIDISGKIVVPG FIDTHLHIESSLVTPHEFDRCVLPYGVTTAICDPHEIANVLGAEGLQFFLDSAMETIMDIRVQLSSCVPATHLETSGADL PIEKLLPFRNHPKVIGLAEFMNFPGVIHKDPVCMAKLEAFQGQHIDGHAPLLSGAALNGYLAAGIRTEHECTSAAEALEK IRKGMHILVREGSVSKDLHALMPIITERLSPYLALCTDDRNPLDIAEQGHLDYMIRTAIASGVEPLAIYRAASISAAKAF GLRDRGLVAPGWRADLVVIDTLQNCKASMVLSGGRLVDDALFATRKPVAPVGLDSVKARPVLASHFGVPVTEGETPVMGV LPGKIITEHRRYKLPTDGNQTTVDLENDIIKVAVIERHGKNGNHANGFVQGFGLKKGAIASTVGHDSHNICVVGVSEDDM ALAANRLGDIKGGFVVVEDGRVTGEIALPVAGLMSLEPYETVRDTLHTLRKAAYALGTTLEEPFLQVAFLPLPVIPHLKI SDMGMVDVDRFALI
Specific function: Unknown
COG id: COG1001
COG function: function code F; Adenine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenine deaminase family
Homologues:
Organism=Escherichia coli, GI1790098, Length=557, Percent_Identity=40.2154398563734, Blast_Score=406, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ADEC1_AGRT5 (Q7CXF0)
Other databases:
- EMBL: AE007869 - PIR: A97635 - PIR: AC2858 - RefSeq: NP_355249.1 - ProteinModelPortal: Q7CXF0 - STRING: Q7CXF0 - GeneID: 1134330 - GenomeReviews: AE007869_GR - KEGG: atu:Atu2292 - eggNOG: COG1001 - HOGENOM: HBG725357 - OMA: GKIITEH - PhylomeDB: Q7CXF0 - ProtClustDB: CLSK881576 - BioCyc: ATUM176299-1:ATU2292-MONOMER - HAMAP: MF_01518 - InterPro: IPR006679 - InterPro: IPR006680 - InterPro: IPR011059 - TIGRFAMs: TIGR01178
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.4.2
Molecular weight: Translated: 61695; Mature: 61564
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIPGVEQKPMSSNLESRIDQGTGREPADMVLKGGRFFDLVTGELVASDIAICGDTVVG CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEE TCGDYKGRHEIDISGKIVVPGFIDTHLHIESSLVTPHEFDRCVLPYGVTTAICDPHEIAN CCCCCCCCEEEECCCEEEECCEECCEEEEECCCCCCHHCCCEEECCCCEEECCCHHHHHH VLGAEGLQFFLDSAMETIMDIRVQLSSCVPATHLETSGADLPIEKLLPFRNHPKVIGLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHCCCCCCCCEEEHHH FMNFPGVIHKDPVCMAKLEAFQGQHIDGHAPLLSGAALNGYLAAGIRTEHECTSAAEALE HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH KIRKGMHILVREGSVSKDLHALMPIITERLSPYLALCTDDRNPLDIAEQGHLDYMIRTAI HHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHH ASGVEPLAIYRAASISAAKAFGLRDRGLVAPGWRADLVVIDTLQNCKASMVLSGGRLVDD HCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEECCCCCCEEEEECCCCCHHH ALFATRKPVAPVGLDSVKARPVLASHFGVPVTEGETPVMGVLPGKIITEHRRYKLPTDGN HHHHCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCCCEEEECCCHHHHCCCCEECCCCCC QTTVDLENDIIKVAVIERHGKNGNHANGFVQGFGLKKGAIASTVGHDSHNICVVGVSEDD CEEEEECCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCEEEEEECCCC MALAANRLGDIKGGFVVVEDGRVTGEIALPVAGLMSLEPYETVRDTLHTLRKAAYALGTT HHHHHHHCCCCCCCEEEEECCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC LEEPFLQVAFLPLPVIPHLKISDMGMVDVDRFALI HHHHHHEEEEECCCCCCCCEECCCCCEECHHHHCC >Mature Secondary Structure AIIPGVEQKPMSSNLESRIDQGTGREPADMVLKGGRFFDLVTGELVASDIAICGDTVVG CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEE TCGDYKGRHEIDISGKIVVPGFIDTHLHIESSLVTPHEFDRCVLPYGVTTAICDPHEIAN CCCCCCCCEEEECCCEEEECCEECCEEEEECCCCCCHHCCCEEECCCCEEECCCHHHHHH VLGAEGLQFFLDSAMETIMDIRVQLSSCVPATHLETSGADLPIEKLLPFRNHPKVIGLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHCCCCCCCCEEEHHH FMNFPGVIHKDPVCMAKLEAFQGQHIDGHAPLLSGAALNGYLAAGIRTEHECTSAAEALE HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH KIRKGMHILVREGSVSKDLHALMPIITERLSPYLALCTDDRNPLDIAEQGHLDYMIRTAI HHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHH ASGVEPLAIYRAASISAAKAFGLRDRGLVAPGWRADLVVIDTLQNCKASMVLSGGRLVDD HCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEECCCCCCEEEEECCCCCHHH ALFATRKPVAPVGLDSVKARPVLASHFGVPVTEGETPVMGVLPGKIITEHRRYKLPTDGN HHHHCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCCCEEEECCCHHHHCCCCEECCCCCC QTTVDLENDIIKVAVIERHGKNGNHANGFVQGFGLKKGAIASTVGHDSHNICVVGVSEDD CEEEEECCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCEEEEEECCCC MALAANRLGDIKGGFVVVEDGRVTGEIALPVAGLMSLEPYETVRDTLHTLRKAAYALGTT HHHHHHHCCCCCCCEEEEECCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC LEEPFLQVAFLPLPVIPHLKISDMGMVDVDRFALI HHHHHHEEEEECCCCCCCCEECCCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194