Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 15889567

GI number: 15889567

Start: 2264840

End: 2265787

Strand: Reverse

Name: rpfG [H]

Synonym: Atu2291

Alternate gene names: 15889567

Gene position: 2265787-2264840 (Counterclockwise)

Preceding gene: 159185144

Following gene: 15889564

Centisome position: 79.74

GC content: 57.17

Gene sequence:

>948_bases
ATGTTGAAACGAATTTCAACCCAGCAATTGGCTGTGGGCATGTTTATCGAAGCGGTCGAGGGGACGTTTTCGAACCATAA
AATTACACAGAAGTACCGTTTTCTTTTGCAGCGCGAGGAGGTTGTGCAGCAGCTGAAAAAAAGTGGGGCAGAGAGCATCG
TCATCAATACTGCCAAGGGCAGCGATGTCGGCGCCAGCCAGGGCCCGGGCAGTGCCGGCGTATCGCAGACGGATCCGTCT
CCATCGATGGTAACAGCGGTCACTCAGGCGGTGCGTTCGGCCGCGGATGTGATCGCCGAGACATTTTCGGTTGCCGAAGG
CGGCGGCTGTGTTTCCTTCCAGGGCATGACGGCGGCGGCGGGAAAGATTTCCGACGCCATTCAGGCCAACCCGGCCGTCT
TCATCGGCGTCACCCGCCTGAAATCGAAGGATGAAACGACCTTCGTGCATTCGGTTTCCGTCAGCGGTCTGATGATCCTC
TTCGGCAATTATCTCGGGCTGAACAAGGAAACAGTCAACCTGCTCGGCGTCAGCGGCTTGCTTCACGATATCGGCAAGGT
CGAAATACCGTCATCCATTCTGAACAAGACGGAGGGGCTCTCCATCGAGGAGCGCGAAATCATCAATCTCCACCCCGCAT
TCGGGCGGGATATCCTGTCGCGTGACGGGCAGATGCCTGACATGGTCCTCGATGTCTGCTTCAATCATCACGAGCGGATC
GATGGCGGCGGTTATCCCAGCGGTCGTGCCGGCGGCGAGATCAGCCTTCATGCGCGCATTGCCGCGATTTGTGATGTCTA
TGATGCCGTCACCTCGGTCAGGCCTTACAAGAAGCCCTGGACGGCGAATGACGCGCTGACCTGGATGCTGCGCCGGGACG
GACATTTCGACATACAGCTTCTGAAGAAGTTCGCGCTCTGTATTTCGGCTTCGCTCCCAAGAGTTTAG

Upstream 100 bases:

>100_bases
GGGAGGGCGTGAACTCTGTGCTTCGAGGGGAGCGGTTACGCCGGGCTCTTGCAAATTTCGGTTCGACCGTAACATCCGGG
AAGGAAATTGAAAGAGTCAG

Downstream 100 bases:

>100_bases
TTGCCGAAGATGATCGCCATGTTCAGACTGTCGATATAGTGCCCGTCGATCGAAACGGCATCGCGGGCCCGGCCCTCATG
CGCAAAGCCGATCTTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLKRISTQQLAVGMFIEAVEGTFSNHKITQKYRFLLQREEVVQQLKKSGAESIVINTAKGSDVGASQGPGSAGVSQTDPS
PSMVTAVTQAVRSAADVIAETFSVAEGGGCVSFQGMTAAAGKISDAIQANPAVFIGVTRLKSKDETTFVHSVSVSGLMIL
FGNYLGLNKETVNLLGVSGLLHDIGKVEIPSSILNKTEGLSIEEREIINLHPAFGRDILSRDGQMPDMVLDVCFNHHERI
DGGGYPSGRAGGEISLHARIAAICDVYDAVTSVRPYKKPWTANDALTWMLRRDGHFDIQLLKKFALCISASLPRV

Sequences:

>Translated_315_residues
MLKRISTQQLAVGMFIEAVEGTFSNHKITQKYRFLLQREEVVQQLKKSGAESIVINTAKGSDVGASQGPGSAGVSQTDPS
PSMVTAVTQAVRSAADVIAETFSVAEGGGCVSFQGMTAAAGKISDAIQANPAVFIGVTRLKSKDETTFVHSVSVSGLMIL
FGNYLGLNKETVNLLGVSGLLHDIGKVEIPSSILNKTEGLSIEEREIINLHPAFGRDILSRDGQMPDMVLDVCFNHHERI
DGGGYPSGRAGGEISLHARIAAICDVYDAVTSVRPYKKPWTANDALTWMLRRDGHFDIQLLKKFALCISASLPRV
>Mature_315_residues
MLKRISTQQLAVGMFIEAVEGTFSNHKITQKYRFLLQREEVVQQLKKSGAESIVINTAKGSDVGASQGPGSAGVSQTDPS
PSMVTAVTQAVRSAADVIAETFSVAEGGGCVSFQGMTAAAGKISDAIQANPAVFIGVTRLKSKDETTFVHSVSVSGLMIL
FGNYLGLNKETVNLLGVSGLLHDIGKVEIPSSILNKTEGLSIEEREIINLHPAFGRDILSRDGQMPDMVLDVCFNHHERI
DGGGYPSGRAGGEISLHARIAAICDVYDAVTSVRPYKKPWTANDALTWMLRRDGHFDIQLLKKFALCISASLPRV

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 33788; Mature: 33788

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRISTQQLAVGMFIEAVEGTFSNHKITQKYRFLLQREEVVQQLKKSGAESIVINTAKG
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SDVGASQGPGSAGVSQTDPSPSMVTAVTQAVRSAADVIAETFSVAEGGGCVSFQGMTAAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH
GKISDAIQANPAVFIGVTRLKSKDETTFVHSVSVSGLMILFGNYLGLNKETVNLLGVSGL
HHHHHHHHCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LHDIGKVEIPSSILNKTEGLSIEEREIINLHPAFGRDILSRDGQMPDMVLDVCFNHHERI
HHHCCCCCCCHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC
DGGGYPSGRAGGEISLHARIAAICDVYDAVTSVRPYKKPWTANDALTWMLRRDGHFDIQL
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCCHHHH
LKKFALCISASLPRV
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKRISTQQLAVGMFIEAVEGTFSNHKITQKYRFLLQREEVVQQLKKSGAESIVINTAKG
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SDVGASQGPGSAGVSQTDPSPSMVTAVTQAVRSAADVIAETFSVAEGGGCVSFQGMTAAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH
GKISDAIQANPAVFIGVTRLKSKDETTFVHSVSVSGLMILFGNYLGLNKETVNLLGVSGL
HHHHHHHHCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LHDIGKVEIPSSILNKTEGLSIEEREIINLHPAFGRDILSRDGQMPDMVLDVCFNHHERI
HHHCCCCCCCHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC
DGGGYPSGRAGGEISLHARIAAICDVYDAVTSVRPYKKPWTANDALTWMLRRDGHFDIQL
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCCHHHH
LKKFALCISASLPRV
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]