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The map label for this gene is lpcC [H]

Identifier: 15889463

GI number: 15889463

Start: 2159353

End: 2160408

Strand: Direct

Name: lpcC [H]

Synonym: Atu2183

Alternate gene names: 15889463

Gene position: 2159353-2160408 (Clockwise)

Preceding gene: 15889462

Following gene: 159185092

Centisome position: 75.99

GC content: 62.03

Gene sequence:

>1056_bases
TTGTCCCACGTCAGTCTGAAAGATGTGCAGGTACTCGCGCCGAATTTCAAGCGCAGGCTCTCCGGCGTCACCTCAACCAT
CGTTCAGCTCATTCCGGTGCAGAACCGGCTGGGGCAGAAGGTGGGCACCATCGGCCCCGGCCTGCCGCCGCATCTGCCGC
ATGTGCGCTTCCGTGACCTGTGGCGGCTTTGGCAAAACGGCCCCTCTGGCGGCCCGCGCATCTGGCATGCCCGCCGCAAT
CTGGAAATGCTGCCGGGCATTTTCATGCGGGACGTTCTGCGCATGAAGGTGAAGCTGCTCTTCACGTCAGCCGCACAGAG
ACGGCATTCCGCCTATACACGCTTTCTGATTTCGAAAATGGATGCGGTGGTTGCGACCAGCACCCGCTCCGGCTCGTTTC
TCGAAGTACCCCACCGCGTCGTCATGCATGGCGTCGATACCGAGCTGTTCCACCCGGCTACAGGCCCCGAAGACACGATC
GCGGCAACCGGCCTACCGGGACACTATCTGCTCGGCTGCTTCGGGCGGGTGCGCCATCAGAAGGGCACCGACCTCTTCGT
GCGCGCCATGATCGAGCTTCTGCCCCACTACCCGCAGTGGACCGCTGTCGTTTCCGGCCGCGTAACGGCAGAACACAAGG
CCTTCGGTGATACGCTCAAGGCCGATGTCGCCGCAGCCGGCCTTACCGACCGGATCATCTTTCAGGGTGAAGTTGACGAC
ATCAAGCCCTGGTACCGTCGGCTGACGCTTTATGTCGCACCATCCCGCAACGAAGGCTTCGGCCTGACGCCACTCGAAGC
CATGGCCTCGGAGACGGCCGTTGTCGCCAGCAATGCCGGCGCCTATGAGGAAATGATCGTCACTGGCGAAACCGGGTGGG
TCGTCGGCGCGGGCGACTACGCATCGCTCAGAGATGCGATAAAGACCTATCTGGCCGATCCTGCTCTGGCCAAAGCTCAT
GCAAGCGCCGGACTTGCGCATGTGCGCAGCACTTTCCCGCTGGAAAAAGAAGCGACATGCCTCGGTGAAGTCTATGAGGC
GTTACAGCGGGGGTGA

Upstream 100 bases:

>100_bases
TCGCAGTTCAGTGGGGCTGATTGGCCCGATGCGATGCGCCTCGAGCGGGCGCATCGCTCCCTGACGAATCAACCTTCAGC
CGCAGAGACGGAAGCCCATC

Downstream 100 bases:

>100_bases
TATCCCCAAAATCGGCTAAAAGCCGGCTGCTCAGATTTCCACGAGGCCGACACGCTTGACCTGACGGATGGTCAGCATGG
TGCGCACCGTGTCGACATTC

Product: lipopolysaccharide core biosynthesis mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSHVSLKDVQVLAPNFKRRLSGVTSTIVQLIPVQNRLGQKVGTIGPGLPPHLPHVRFRDLWRLWQNGPSGGPRIWHARRN
LEMLPGIFMRDVLRMKVKLLFTSAAQRRHSAYTRFLISKMDAVVATSTRSGSFLEVPHRVVMHGVDTELFHPATGPEDTI
AATGLPGHYLLGCFGRVRHQKGTDLFVRAMIELLPHYPQWTAVVSGRVTAEHKAFGDTLKADVAAAGLTDRIIFQGEVDD
IKPWYRRLTLYVAPSRNEGFGLTPLEAMASETAVVASNAGAYEEMIVTGETGWVVGAGDYASLRDAIKTYLADPALAKAH
ASAGLAHVRSTFPLEKEATCLGEVYEALQRG

Sequences:

>Translated_351_residues
MSHVSLKDVQVLAPNFKRRLSGVTSTIVQLIPVQNRLGQKVGTIGPGLPPHLPHVRFRDLWRLWQNGPSGGPRIWHARRN
LEMLPGIFMRDVLRMKVKLLFTSAAQRRHSAYTRFLISKMDAVVATSTRSGSFLEVPHRVVMHGVDTELFHPATGPEDTI
AATGLPGHYLLGCFGRVRHQKGTDLFVRAMIELLPHYPQWTAVVSGRVTAEHKAFGDTLKADVAAAGLTDRIIFQGEVDD
IKPWYRRLTLYVAPSRNEGFGLTPLEAMASETAVVASNAGAYEEMIVTGETGWVVGAGDYASLRDAIKTYLADPALAKAH
ASAGLAHVRSTFPLEKEATCLGEVYEALQRG
>Mature_350_residues
SHVSLKDVQVLAPNFKRRLSGVTSTIVQLIPVQNRLGQKVGTIGPGLPPHLPHVRFRDLWRLWQNGPSGGPRIWHARRNL
EMLPGIFMRDVLRMKVKLLFTSAAQRRHSAYTRFLISKMDAVVATSTRSGSFLEVPHRVVMHGVDTELFHPATGPEDTIA
ATGLPGHYLLGCFGRVRHQKGTDLFVRAMIELLPHYPQWTAVVSGRVTAEHKAFGDTLKADVAAAGLTDRIIFQGEVDDI
KPWYRRLTLYVAPSRNEGFGLTPLEAMASETAVVASNAGAYEEMIVTGETGWVVGAGDYASLRDAIKTYLADPALAKAHA
SAGLAHVRSTFPLEKEATCLGEVYEALQRG

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 38548; Mature: 38417

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVSLKDVQVLAPNFKRRLSGVTSTIVQLIPVQNRLGQKVGTIGPGLPPHLPHVRFRDL
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
WRLWQNGPSGGPRIWHARRNLEMLPGIFMRDVLRMKVKLLFTSAAQRRHSAYTRFLISKM
HHHHHCCCCCCCEEEEHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVVATSTRSGSFLEVPHRVVMHGVDTELFHPATGPEDTIAATGLPGHYLLGCFGRVRHQ
HHHHEECCCCCCCHHCCHHHHHHCCCHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHCC
KGTDLFVRAMIELLPHYPQWTAVVSGRVTAEHKAFGDTLKADVAAAGLTDRIIFQGEVDD
CCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
IKPWYRRLTLYVAPSRNEGFGLTPLEAMASETAVVASNAGAYEEMIVTGETGWVVGAGDY
HHHHHHEEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEECCCH
ASLRDAIKTYLADPALAKAHASAGLAHVRSTFPLEKEATCLGEVYEALQRG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHVSLKDVQVLAPNFKRRLSGVTSTIVQLIPVQNRLGQKVGTIGPGLPPHLPHVRFRDL
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
WRLWQNGPSGGPRIWHARRNLEMLPGIFMRDVLRMKVKLLFTSAAQRRHSAYTRFLISKM
HHHHHCCCCCCCEEEEHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVVATSTRSGSFLEVPHRVVMHGVDTELFHPATGPEDTIAATGLPGHYLLGCFGRVRHQ
HHHHEECCCCCCCHHCCHHHHHHCCCHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHCC
KGTDLFVRAMIELLPHYPQWTAVVSGRVTAEHKAFGDTLKADVAAAGLTDRIIFQGEVDD
CCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
IKPWYRRLTLYVAPSRNEGFGLTPLEAMASETAVVASNAGAYEEMIVTGETGWVVGAGDY
HHHHHHEEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEECCCH
ASLRDAIKTYLADPALAKAHASAGLAHVRSTFPLEKEATCLGEVYEALQRG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9756877 [H]