Click here to switch to the map view.

The map label for this gene is 15889460

Identifier: 15889460

GI number: 15889460

Start: 2155897

End: 2157342

Strand: Reverse

Name: 15889460

Synonym: Atu2180

Alternate gene names: NA

Gene position: 2157342-2155897 (Counterclockwise)

Preceding gene: 159185091

Following gene: 159185090

Centisome position: 75.92

GC content: 61.83

Gene sequence:

>1446_bases
ATGTATGGACCGGTTCTGGAAGGGCGGGGCGAGTTCGGCGAGTGGCGAGATGCCGCACGTGCGGCCCTTGCCGCCGATAT
CCGGCCGGAAATGATTGACTGGCGGCTGCGGGATGACGGAGCGGGGCTTCTCGACTTTGCGGGTGAGCCATTGCCGGTGG
TTGCTGCCGGGGACGGGCAGGTTTCCGTCCCGGCCTCCTTCGTCGCGCTGGCGCAGGCCATCATCTGTCACAGCGAGCCC
GGCCGCTTCGCGCTGCTTTACCGGCTGTTGTGGCGGCTGAAGCGGGATCGCGCCCTGTTGCAGTTCAAGTCCGATCCTGA
CGTTGCCGAGGCGCGGCTGCTGGAGAAATCCGTGCGCCGCGACTGTCACAAGATGACGGCCTTCGTTCGTTTCAAGGAAG
TGCCCCTGCCGCAGGGGCAGGGCGGGCGTCGGCGGTTTATTGCCTGGTTCGAGCCGGATCATTTCATCGTCGAGCGGACG
GCAGCGTTTTTCCAGCGCCGGTTCACCGATATGGACTGGCTGATCGCGACGCCGAAAGGGTCTGCTCGGTGGGATGGAGA
TGAGTTGCAGACCTCGCGGGAGGCGGCGGTAAAACCCGATCTGACGGATGAGACGGATGAACTCTGGCGAACCTATTATG
CCAATATTTTCAATCCGGCCCGCCTGAAGATCAAGGCGATGACGGCGGAAATGCCGAAAAAATACTGGAAGAACCTGCCG
GAAGCGGACCTCATACCCGGTCTTGTCCTAGGGGCAGAAGCGCGGGTGCTGGAGATGGCGGCCAAGGCGGCAAGCCAGCC
GCAACCCTTCCACCACCGGCTGCAGGCCGCAGCGTCTGCGCGCGAGATGCCGCAACCGGTGTCGGACGGCACGCTTCAAT
CGCTGGCGCGGGAGGCTCGCCAATGCACTCGCTGCGCCCTGCATTGCAAGGCGACGCAGACCGTTTTCGGGGAGGGGCCC
GAAGATGCTGATATCATGATCGTCGGCGAACAGCCCGGTGATAACGAAGATCTCGCCGGCAAGCCTTTCATAGGCCCGGC
GGGTCAGCTTTTTGACAGAACTCTCCGTGAGATCGGTGCCGAGCGCAAAAAGCTCTACGTCACCAATGCCGTCAAGCACT
TCAAATATGAGACGCGTGGCAAGAGGCGCATCCATCAGCGGCCCAACGCGGGAGAGGTGGAGCAATGTCGCTGGTGGCTT
AACCGGGAAATCGCGCTCGTGCGGCCGAAACTGATCGTGGCCATGGGCGCAACCGCGCTTTATGCGCTGACCGGCGGCAA
GGAGAAGGTTTCCGAAATCCGTGGGCGTCCTTTACCGATGGAGGAGGGCAGGACGCTTTTTGTCACCGTGCATCCGTCCT
ATCTCCTGCGCCTTGCCGATATCAGGGCGAAAGAGGCGGAAATGGCGCGCTTCCGGATGGATATGGAGATAATAAGGAAA
TTCTAA

Upstream 100 bases:

>100_bases
CCTTCGTCGTGGCTGACGGCTGGACGCCGGGCAAGTTGACCGAACGGCCGGACCTGCGGGCGATGTTTGCGCCGCAGCCC
GAACAATTGTCGCTACTCTG

Downstream 100 bases:

>100_bases
TATATTTTTTTACGTATTAAACGTTTACTTTGAATGTGGACTATGATTCTCAATAATACTTTTTACAGGTTGTTTATCTG
TAATTTTTATTGAAAATTTA

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Protein; DNA Polymerase; DNA-Directed DNA Polymerase; Helicase/Glycosylase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Glycosylase; Uracil DNA Glycosylase Protein; Uracil-DNA Glycosylase Family 4 Protein; Uracil DNA Glycosylase; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MYGPVLEGRGEFGEWRDAARAALAADIRPEMIDWRLRDDGAGLLDFAGEPLPVVAAGDGQVSVPASFVALAQAIICHSEP
GRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRRDCHKMTAFVRFKEVPLPQGQGGRRRFIAWFEPDHFIVERT
AAFFQRRFTDMDWLIATPKGSARWDGDELQTSREAAVKPDLTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
EADLIPGLVLGAEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREARQCTRCALHCKATQTVFGEGP
EDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGAERKKLYVTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWL
NREIALVRPKLIVAMGATALYALTGGKEKVSEIRGRPLPMEEGRTLFVTVHPSYLLRLADIRAKEAEMARFRMDMEIIRK
F

Sequences:

>Translated_481_residues
MYGPVLEGRGEFGEWRDAARAALAADIRPEMIDWRLRDDGAGLLDFAGEPLPVVAAGDGQVSVPASFVALAQAIICHSEP
GRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRRDCHKMTAFVRFKEVPLPQGQGGRRRFIAWFEPDHFIVERT
AAFFQRRFTDMDWLIATPKGSARWDGDELQTSREAAVKPDLTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
EADLIPGLVLGAEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREARQCTRCALHCKATQTVFGEGP
EDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGAERKKLYVTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWL
NREIALVRPKLIVAMGATALYALTGGKEKVSEIRGRPLPMEEGRTLFVTVHPSYLLRLADIRAKEAEMARFRMDMEIIRK
F
>Mature_481_residues
MYGPVLEGRGEFGEWRDAARAALAADIRPEMIDWRLRDDGAGLLDFAGEPLPVVAAGDGQVSVPASFVALAQAIICHSEP
GRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRRDCHKMTAFVRFKEVPLPQGQGGRRRFIAWFEPDHFIVERT
AAFFQRRFTDMDWLIATPKGSARWDGDELQTSREAAVKPDLTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
EADLIPGLVLGAEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREARQCTRCALHCKATQTVFGEGP
EDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGAERKKLYVTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWL
NREIALVRPKLIVAMGATALYALTGGKEKVSEIRGRPLPMEEGRTLFVTVHPSYLLRLADIRAKEAEMARFRMDMEIIRK
F

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 54433; Mature: 54433

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGPVLEGRGEFGEWRDAARAALAADIRPEMIDWRLRDDGAGLLDFAGEPLPVVAAGDGQ
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCEEEEEECCCC
VSVPASFVALAQAIICHSEPGRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRR
EECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
DCHKMTAFVRFKEVPLPQGQGGRRRFIAWFEPDHFIVERTAAFFQRRFTDMDWLIATPKG
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCC
SARWDGDELQTSREAAVKPDLTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
CCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCC
EADLIPGLVLGAEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREAR
CCHHCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QCTRCALHCKATQTVFGEGPEDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGA
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
ERKKLYVTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWLNREIALVRPKLIVAMGATAL
HHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCHHHHHHCCHHE
YALTGGKEKVSEIRGRPLPMEEGRTLFVTVHPSYLLRLADIRAKEAEMARFRMDMEIIRK
EEECCCHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MYGPVLEGRGEFGEWRDAARAALAADIRPEMIDWRLRDDGAGLLDFAGEPLPVVAAGDGQ
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCEEEEEECCCC
VSVPASFVALAQAIICHSEPGRFALLYRLLWRLKRDRALLQFKSDPDVAEARLLEKSVRR
EECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
DCHKMTAFVRFKEVPLPQGQGGRRRFIAWFEPDHFIVERTAAFFQRRFTDMDWLIATPKG
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCC
SARWDGDELQTSREAAVKPDLTDETDELWRTYYANIFNPARLKIKAMTAEMPKKYWKNLP
CCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCC
EADLIPGLVLGAEARVLEMAAKAASQPQPFHHRLQAAASAREMPQPVSDGTLQSLAREAR
CCHHCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QCTRCALHCKATQTVFGEGPEDADIMIVGEQPGDNEDLAGKPFIGPAGQLFDRTLREIGA
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
ERKKLYVTNAVKHFKYETRGKRRIHQRPNAGEVEQCRWWLNREIALVRPKLIVAMGATAL
HHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCHHHHHHCCHHE
YALTGGKEKVSEIRGRPLPMEEGRTLFVTVHPSYLLRLADIRAKEAEMARFRMDMEIIRK
EEECCCHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA