Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889458
Identifier: 15889458
GI number: 15889458
Start: 2154370
End: 2154558
Strand: Direct
Name: 15889458
Synonym: Atu8025
Alternate gene names: NA
Gene position: 2154370-2154558 (Clockwise)
Preceding gene: 159185089
Following gene: 15889462
Centisome position: 75.82
GC content: 58.2
Gene sequence:
>189_bases ATGATCGGACGTCCTTCAGGGCCACAGCGGGTGGCATTTCCGCTTCGAATCGAACCCGCCATATTGAACGCGATCCGGCA GACCGCGAGCGGTGAGTTGCGCAGCATCAATGCCCAGATCGAAATTCTACTGAAAGAGGCCTTGCGACATCGCGCCACTG CAGATGCAGCGAAAGAGCCGACAGGCTGA
Upstream 100 bases:
>100_bases GACATCATTCTCACATGAGGCTCATGATGACTTTTTGCGTTCCCGAAAAACCCTCCCCCACCGCCGGCCGCGCCGCGCCC CTGAATTCGAGGGTTAATTC
Downstream 100 bases:
>100_bases GCAGAGGCTGCCATCTTGGGAAAACAGGCGCAGGCTTTTCCGCTTCTTACGCGGCCAGCGCCTCGCGAACGCAATTGCGC CCTTCGGTCTTTGCCCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MIGRPSGPQRVAFPLRIEPAILNAIRQTASGELRSINAQIEILLKEALRHRATADAAKEPTG
Sequences:
>Translated_62_residues MIGRPSGPQRVAFPLRIEPAILNAIRQTASGELRSINAQIEILLKEALRHRATADAAKEPTG >Mature_62_residues MIGRPSGPQRVAFPLRIEPAILNAIRQTASGELRSINAQIEILLKEALRHRATADAAKEPTG
Specific function: Unknown
COG id: COG4877
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6716; Mature: 6716
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRPSGPQRVAFPLRIEPAILNAIRQTASGELRSINAQIEILLKEALRHRATADAAKEP CCCCCCCCCEEEECEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TG CC >Mature Secondary Structure MIGRPSGPQRVAFPLRIEPAILNAIRQTASGELRSINAQIEILLKEALRHRATADAAKEP CCCCCCCCCEEEECEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA