Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15889455

Identifier: 15889455

GI number: 15889455

Start: 2149114

End: 2149602

Strand: Reverse

Name: 15889455

Synonym: Atu2176

Alternate gene names: NA

Gene position: 2149602-2149114 (Counterclockwise)

Preceding gene: 159185090

Following gene: 15889454

Centisome position: 75.65

GC content: 55.21

Gene sequence:

>489_bases
ATGTCATTCCAGCCTTTGTTAGATGCACCGCTTGCCGTGCAGTTCCATGTCGCCACCGTTATACCTGCAGCCGTTCTTGG
CGCCTTCATTTTCCTGCGTCCCAAGGGCACCGCCATCCACCGGCTGCTCGGCAAGATCTGGGTGGCGCTGATGGTCGCGA
CATCAGTTTCGACCTTCTTCATCCATGAATTGAAGGTGTTTTATGGTTTCAGCCCGATCCATCTGCTGTCCATCTTCACC
ATTTACGGCTGTCTGCAATCGGTCTATTTCGCGCGCCGCGGCGATATCCGACGCCATAGGCGCATCATGCAGAGTGTTTA
TCTCGGCGGTATCGTGATTGCCGGCGGCTTCACCTTCCTTCCCGGACGTATCATGCATGAGGCCGTTTTGGGTGACGGAA
AAGCCGATTTTGTGGCCCTTTCCGCCGGTGTGCTGGTGTTTGCCTTCCTGTTTCTGACGGTATTGAAACAGCGCCGTCGG
ACCATATGA

Upstream 100 bases:

>100_bases
TGATCCACGAAGTTTTCCTGCTGATGGCGCCAATCCGTTTTTCTTGTCCGTATGTTTCGCTGAAATTGCCGGTGATTTCA
ACCGAGCCGAAGCAGCGCCC

Downstream 100 bases:

>100_bases
AAGGTTCCGTTGGCCTCCTCTGCTTTCTTCCGGAACAAGATGTATTATAGTGCCGTTATAAAGCAGCTTGTTGAGGCGAC
GTTCGCCGGGAGAAAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSFQPLLDAPLAVQFHVATVIPAAVLGAFIFLRPKGTAIHRLLGKIWVALMVATSVSTFFIHELKVFYGFSPIHLLSIFT
IYGCLQSVYFARRGDIRRHRRIMQSVYLGGIVIAGGFTFLPGRIMHEAVLGDGKADFVALSAGVLVFAFLFLTVLKQRRR
TI

Sequences:

>Translated_162_residues
MSFQPLLDAPLAVQFHVATVIPAAVLGAFIFLRPKGTAIHRLLGKIWVALMVATSVSTFFIHELKVFYGFSPIHLLSIFT
IYGCLQSVYFARRGDIRRHRRIMQSVYLGGIVIAGGFTFLPGRIMHEAVLGDGKADFVALSAGVLVFAFLFLTVLKQRRR
TI
>Mature_161_residues
SFQPLLDAPLAVQFHVATVIPAAVLGAFIFLRPKGTAIHRLLGKIWVALMVATSVSTFFIHELKVFYGFSPIHLLSIFTI
YGCLQSVYFARRGDIRRHRRIMQSVYLGGIVIAGGFTFLPGRIMHEAVLGDGKADFVALSAGVLVFAFLFLTVLKQRRRT
I

Specific function: Unknown

COG id: COG5395

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17995; Mature: 17864

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQPLLDAPLAVQFHVATVIPAAVLGAFIFLRPKGTAIHRLLGKIWVALMVATSVSTFF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IHELKVFYGFSPIHLLSIFTIYGCLQSVYFARRGDIRRHRRIMQSVYLGGIVIAGGFTFL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCHHHC
PGRIMHEAVLGDGKADFVALSAGVLVFAFLFLTVLKQRRRTI
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFQPLLDAPLAVQFHVATVIPAAVLGAFIFLRPKGTAIHRLLGKIWVALMVATSVSTFF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IHELKVFYGFSPIHLLSIFTIYGCLQSVYFARRGDIRRHRRIMQSVYLGGIVIAGGFTFL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCHHHC
PGRIMHEAVLGDGKADFVALSAGVLVFAFLFLTVLKQRRRTI
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA