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The map label for this gene is ypfJ [H]

Identifier: 15889454

GI number: 15889454

Start: 2148098

End: 2149015

Strand: Reverse

Name: ypfJ [H]

Synonym: Atu2175

Alternate gene names: 15889454

Gene position: 2149015-2148098 (Counterclockwise)

Preceding gene: 15889455

Following gene: 15889451

Centisome position: 75.63

GC content: 59.69

Gene sequence:

>918_bases
ATGGAATGGAAAGGGCGTCGCCAGTCGGACAATATCGAGGACCGGCGCGGCATGTCGGCGGGTTCGGGTGATCCTTTTTC
CCGAGGCGGGATGCGCGTGCCAATCGGGCGTCGCGGCGGCGGTATAGGGATTGGTGGTCTTCTGGTCATTCTTCTGATCA
GCTGGGTGCTTGGCATCAACCCACTGACGCTGCTGACCGGCGGCGATATGTCGATGGATGGCGGCGGCACGACGCAATCG
GGAACCCAGCAATCCGGCACACGTCCGCAGGGCCAGTCATCCGATGAGACGACGGCTTTCGTGCGCACCGTGCTGGCGGA
AACCGAGGATACCTGGAGCGGTATCTTCCAATCCGCCGGTGAGACCTATCAGAAACCGACGCTGGTGCTGTTCTCCGGGC
AGGTTTCTTCCGCCTGTGGCAATGCTTCCGCTGCCAGCGGCCCGTTTTATTGCCCTGGTGACCGCAAGGTCTATCTCGAT
ACCAACTTCTTCAAGGAACTGGATCAGCGTTTCGGCGCGTCCGGCGACTTCGCGCAGGCCTATGTGATTGCGCATGAGGT
TGGCCACCACGTACAGAACCTCACCGGTGTCCTGCCGGAGTTCAACCGTCGCCGCCAGTCGATGAGCCAGACGGATGCAA
ACAAGATGTCGGTGCGTGTGGAGCTTCAGGCGGATTGTTATGCCGGCATCTGGGGCAAGTTCACCGAACAGAAGGGCATT
CTCGAGACCGGCGATCTTGAGGAAGCGCTGAATGCGGCCCATCAGATCGGCGACGATACGTTGCAGAAGCAGACGCAAGG
TTATGTGGTGCCTGACAGTTTCAACCACGGCACCTCGGCGCAGCGCATGGAATGGTTCAAGCGCGGCTTCCAGAATGGTC
GTGTCGAGGATTGCGATACTTTCTCGGCGAATATCTGA

Upstream 100 bases:

>100_bases
GAAAGGTTCCGTTGGCCTCCTCTGCTTTCTTCCGGAACAAGATGTATTATAGTGCCGTTATAAAGCAGCTTGTTGAGGCG
ACGTTCGCCGGGAGAAAAAT

Downstream 100 bases:

>100_bases
GAGATCAGATGAAAAAGGGGGCTTTCAGCCCCCTTTTTCATTCAGCTCATCAAGAGCGCCACGGCATACATGCCCAGCGC
GAAGATGGTATGGGCCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MEWKGRRQSDNIEDRRGMSAGSGDPFSRGGMRVPIGRRGGGIGIGGLLVILLISWVLGINPLTLLTGGDMSMDGGGTTQS
GTQQSGTRPQGQSSDETTAFVRTVLAETEDTWSGIFQSAGETYQKPTLVLFSGQVSSACGNASAASGPFYCPGDRKVYLD
TNFFKELDQRFGASGDFAQAYVIAHEVGHHVQNLTGVLPEFNRRRQSMSQTDANKMSVRVELQADCYAGIWGKFTEQKGI
LETGDLEEALNAAHQIGDDTLQKQTQGYVVPDSFNHGTSAQRMEWFKRGFQNGRVEDCDTFSANI

Sequences:

>Translated_305_residues
MEWKGRRQSDNIEDRRGMSAGSGDPFSRGGMRVPIGRRGGGIGIGGLLVILLISWVLGINPLTLLTGGDMSMDGGGTTQS
GTQQSGTRPQGQSSDETTAFVRTVLAETEDTWSGIFQSAGETYQKPTLVLFSGQVSSACGNASAASGPFYCPGDRKVYLD
TNFFKELDQRFGASGDFAQAYVIAHEVGHHVQNLTGVLPEFNRRRQSMSQTDANKMSVRVELQADCYAGIWGKFTEQKGI
LETGDLEEALNAAHQIGDDTLQKQTQGYVVPDSFNHGTSAQRMEWFKRGFQNGRVEDCDTFSANI
>Mature_305_residues
MEWKGRRQSDNIEDRRGMSAGSGDPFSRGGMRVPIGRRGGGIGIGGLLVILLISWVLGINPLTLLTGGDMSMDGGGTTQS
GTQQSGTRPQGQSSDETTAFVRTVLAETEDTWSGIFQSAGETYQKPTLVLFSGQVSSACGNASAASGPFYCPGDRKVYLD
TNFFKELDQRFGASGDFAQAYVIAHEVGHHVQNLTGVLPEFNRRRQSMSQTDANKMSVRVELQADCYAGIWGKFTEQKGI
LETGDLEEALNAAHQIGDDTLQKQTQGYVVPDSFNHGTSAQRMEWFKRGFQNGRVEDCDTFSANI

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=305, Percent_Identity=49.1803278688525, Blast_Score=299, Evalue=1e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33100; Mature: 33100

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWKGRRQSDNIEDRRGMSAGSGDPFSRGGMRVPIGRRGGGIGIGGLLVILLISWVLGIN
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
PLTLLTGGDMSMDGGGTTQSGTQQSGTRPQGQSSDETTAFVRTVLAETEDTWSGIFQSAG
CEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC
ETYQKPTLVLFSGQVSSACGNASAASGPFYCPGDRKVYLDTNFFKELDQRFGASGDFAQA
HHHCCCEEEEECCCHHHHCCCCCCCCCCEECCCCCEEEECHHHHHHHHHHHCCCCCHHHH
YVIAHEVGHHVQNLTGVLPEFNRRRQSMSQTDANKMSVRVELQADCYAGIWGKFTEQKGI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCC
LETGDLEEALNAAHQIGDDTLQKQTQGYVVPDSFNHGTSAQRMEWFKRGFQNGRVEDCDT
CCCCCHHHHHHHHHHCCHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
FSANI
CCCCC
>Mature Secondary Structure
MEWKGRRQSDNIEDRRGMSAGSGDPFSRGGMRVPIGRRGGGIGIGGLLVILLISWVLGIN
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
PLTLLTGGDMSMDGGGTTQSGTQQSGTRPQGQSSDETTAFVRTVLAETEDTWSGIFQSAG
CEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC
ETYQKPTLVLFSGQVSSACGNASAASGPFYCPGDRKVYLDTNFFKELDQRFGASGDFAQA
HHHCCCEEEEECCCHHHHCCCCCCCCCCEECCCCCEEEECHHHHHHHHHHHCCCCCHHHH
YVIAHEVGHHVQNLTGVLPEFNRRRQSMSQTDANKMSVRVELQADCYAGIWGKFTEQKGI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCC
LETGDLEEALNAAHQIGDDTLQKQTQGYVVPDSFNHGTSAQRMEWFKRGFQNGRVEDCDT
CCCCCHHHHHHHHHHCCHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
FSANI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]