Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889433
Identifier: 15889433
GI number: 15889433
Start: 2116872
End: 2117513
Strand: Reverse
Name: 15889433
Synonym: Atu2152
Alternate gene names: NA
Gene position: 2117513-2116872 (Counterclockwise)
Preceding gene: 159185077
Following gene: 159185073
Centisome position: 74.52
GC content: 58.26
Gene sequence:
>642_bases ATGAGTTACACAGCACTATTTTCAGCCGGAGCCTTATTTTCCGTGATATTCGCGAGTGTGGCGGAAGCGCGGAAGGATCG TTTATTCGCCATCTCCGAATCCGGTGGCGGCGAGACGATTGCTCTCGTCTACGATTTGCCGAATACCCCCGCTTTTCTGG CGGAGGGAAACACGCTCGATCTCGGTTTTCTGAACAGCGACAGTGGCAGCGGTTATGTTCTGTATTATGGCGACCGTTAT ACCAGGCTCAGCGATGCCGATGTTGGGCGATTGAAGTCTAGGCTTGGTTTCGATCCGACGATCCAGCACCGCCTGGAACG CGCAGCCCGCGAAAAGCAGAATGAGCGCTGGAATCTGGCTATTTTTTTCATCGTGCTGGTGGTCGGCTTTTTTCTGGTCG TCCTTAAGGGTCTGGACGCCGTCCGGTGGTTTTGGCGATTGCTGACAATGCTCGTCGACACTGACAAAGGGCAGGCGGCT GAGCCTCACGATCCACTCAAAGCTCGCAAGAAGCGGCTGGTGAGACCTCAGTACAGCCGGCCTCGGACAGATTCCGTTGC CGCCAGCCCGGCGCCCCCGCCGGTGGAGGCCTCACCCCCGACAGGCGGCACGGCCCGGGCTTTTGGGCGCAGGACCAAGT GA
Upstream 100 bases:
>100_bases AATATATCTGGTATTGTTAAAACTATAATTCTGATGTAAATGTCAGTTTAAGCGAGATATTCTATTAGTTTTTCATTCTT TTTTCTATTTTGAGGAATGG
Downstream 100 bases:
>100_bases AGCGAAACCGAATGGCTGCGACCGGTACTATTCGAACCGGTCGATGATGCTGATGCCGCTCTCCTGGAACCTATCCATTC CGGGCAGGGCGACGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSYTALFSAGALFSVIFASVAEARKDRLFAISESGGGETIALVYDLPNTPAFLAEGNTLDLGFLNSDSGSGYVLYYGDRY TRLSDADVGRLKSRLGFDPTIQHRLERAAREKQNERWNLAIFFIVLVVGFFLVVLKGLDAVRWFWRLLTMLVDTDKGQAA EPHDPLKARKKRLVRPQYSRPRTDSVAASPAPPPVEASPPTGGTARAFGRRTK
Sequences:
>Translated_213_residues MSYTALFSAGALFSVIFASVAEARKDRLFAISESGGGETIALVYDLPNTPAFLAEGNTLDLGFLNSDSGSGYVLYYGDRY TRLSDADVGRLKSRLGFDPTIQHRLERAAREKQNERWNLAIFFIVLVVGFFLVVLKGLDAVRWFWRLLTMLVDTDKGQAA EPHDPLKARKKRLVRPQYSRPRTDSVAASPAPPPVEASPPTGGTARAFGRRTK >Mature_212_residues SYTALFSAGALFSVIFASVAEARKDRLFAISESGGGETIALVYDLPNTPAFLAEGNTLDLGFLNSDSGSGYVLYYGDRYT RLSDADVGRLKSRLGFDPTIQHRLERAAREKQNERWNLAIFFIVLVVGFFLVVLKGLDAVRWFWRLLTMLVDTDKGQAAE PHDPLKARKKRLVRPQYSRPRTDSVAASPAPPPVEASPPTGGTARAFGRRTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23527; Mature: 23396
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTALFSAGALFSVIFASVAEARKDRLFAISESGGGETIALVYDLPNTPAFLAEGNTLD CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCEEEECCCEEE LGFLNSDSGSGYVLYYGDRYTRLSDADVGRLKSRLGFDPTIQHRLERAAREKQNERWNLA EEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH IFFIVLVVGFFLVVLKGLDAVRWFWRLLTMLVDTDKGQAAEPHDPLKARKKRLVRPQYSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC PRTDSVAASPAPPPVEASPPTGGTARAFGRRTK CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure SYTALFSAGALFSVIFASVAEARKDRLFAISESGGGETIALVYDLPNTPAFLAEGNTLD CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCEEEECCCEEE LGFLNSDSGSGYVLYYGDRYTRLSDADVGRLKSRLGFDPTIQHRLERAAREKQNERWNLA EEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH IFFIVLVVGFFLVVLKGLDAVRWFWRLLTMLVDTDKGQAAEPHDPLKARKKRLVRPQYSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC PRTDSVAASPAPPPVEASPPTGGTARAFGRRTK CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA