Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889428
Identifier: 15889428
GI number: 15889428
Start: 2111661
End: 2112767
Strand: Direct
Name: 15889428
Synonym: Atu2147
Alternate gene names: NA
Gene position: 2111661-2112767 (Clockwise)
Preceding gene: 159185072
Following gene: 159185074
Centisome position: 74.31
GC content: 60.89
Gene sequence:
>1107_bases GTGATCTCTCACTGCCGCCGACTGCTTGCTACGACCACCGCACTGGTCATCGCCTCCACCGCGATTGCCGCCGCTGAACC GAGCGCTGAACTGATCGCTGCCGCCAAGAAGGAAGGCATGCTGACCACCGTCGCGCTGCCGCACGACTGGTGCGGATATG GCGACGTGATCGCCGCGTTCAAGGCAAAATATCCGGAAATCACCGTCAACGAACTGAACCCCGACGCCGGTTCCGCCGAC GAAGTGGAAGCGGTCAAGGCGAACAAGGACAATAAGGGGCCGCAGGCTCCTGACGTTGTCGACGTCGGTCTCGCCTTTGG ACCGCAGATGAAGGCCGAAGGCCTGCTGCAGCCCTACAAGGTCTCCACCTGGGCCGAAATCCCTGACAACGTCAAGGATG CCGACGGTTACTGGTACGGCGACTATTACGGCGTCATGTCGATGTTCGTAAACAAGGATCTCGTCAAGAACGTGCCGAAG GATTGGGCCGACCTGCTGAAGCCGGAATATTCCGGTCAGGTAGCGCTCGCTGGCGATCCGCGCGCCTCCAACCAGGCGAT CCTCGGCGTTCTCGCCGCCGGTCTTTCCACCGGCGCGAAATCCGGCAAGGAAGCCGGTGAAGCTGGCCTGAAGTATTTCG CCGACCTCAACAAGGCTGGTAACTTCCTTCCGGTCATCGGCAAGGCTGGCACGCTGGCACAGGGCGCGACCCCGATCATC GTCGCCTGGGACTACAACGCCCTTTCCTGGAAGAAGACGCTGAACGACAACCCGCCGACCGAAGTCGTCGTGCCTGAAAA GGGTGTTCTCGCTGGCGTTTACGTTCAGGGCATTTCCGCCTACGCGCCGCATCCGAATGCTGCAAAGCTCTGGATGGAGC ATCTCTATTCGGACGACGGTCAGCTCGGCTGGCTGAAGGGCTATTGCCACCCGATCCGCTTCAACGCCATGGTCAAGGCC GGCAAGGTTCCGCAGGAACTGATCGACAGCCTGCCGCCGGCAGCAGCCTATGAAAAGGCGATCTTCCCGACACTCGAGGA AGTTGATGCCAACAAGGCTGCCGTCACCGGCGGCTGGGACAAAGTCGTCGGCGCAAACGTGAAGTAA
Upstream 100 bases:
>100_bases GCGGAATCCGGATAAATAAATTGCAATCCAACCGTCACATTAGCTTCATCGAGACTCCGTATCAGCGTCCGCAATATGAG AACACGAAGAGGAGAAAAAA
Downstream 100 bases:
>100_bases ACTGCTGAAAACGCACCCCGGCCGATCCAAAGCCGGGGTGCTTCTTTAAAAGCATTTCCAGTAAAAGTGCGTCGCGGTTT TACGTCCGGAAAATGCGCAA
Product: ABC transporter, substrate binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MISHCRRLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEITVNELNPDAGSAD EVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPK DWADLLKPEYSGQVALAGDPRASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPII VAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGWLKGYCHPIRFNAMVKA GKVPQELIDSLPPAAAYEKAIFPTLEEVDANKAAVTGGWDKVVGANVK
Sequences:
>Translated_368_residues MISHCRRLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEITVNELNPDAGSAD EVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPK DWADLLKPEYSGQVALAGDPRASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPII VAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGWLKGYCHPIRFNAMVKA GKVPQELIDSLPPAAAYEKAIFPTLEEVDANKAAVTGGWDKVVGANVK >Mature_368_residues MISHCRRLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEITVNELNPDAGSAD EVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPK DWADLLKPEYSGQVALAGDPRASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPII VAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGWLKGYCHPIRFNAMVKA GKVPQELIDSLPPAAAYEKAIFPTLEEVDANKAAVTGGWDKVVGANVK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39056; Mature: 39056
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISHCRRLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAF CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH KAKYPEITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYK HCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECHHCCCCCCHHCCCCCCC VSTWAEIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPKDWADLLKPEYSGQVALAGDP CCCHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCC RASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPII CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEE VAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDG EEECCCCEEHHHHCCCCCCCEEEECCCCCEEHHHHHCHHHCCCCCCHHHHHHHHHHCCCC QLGWLKGYCHPIRFNAMVKAGKVPQELIDSLPPAAAYEKAIFPTLEEVDANKAAVTGGWD CEEEHHCCCCEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCHHHHCCCCEEEECCHH KVVGANVK HCCCCCCC >Mature Secondary Structure MISHCRRLLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAF CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH KAKYPEITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYK HCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECHHCCCCCCHHCCCCCCC VSTWAEIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPKDWADLLKPEYSGQVALAGDP CCCHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCC RASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPII CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEE VAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDG EEECCCCEEHHHHCCCCCCCEEEECCCCCEEHHHHHCHHHCCCCCCHHHHHHHHHHCCCC QLGWLKGYCHPIRFNAMVKAGKVPQELIDSLPPAAAYEKAIFPTLEEVDANKAAVTGGWD CEEEHHCCCCEEEEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCHHHHCCCCEEEECCHH KVVGANVK HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA