Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889425
Identifier: 15889425
GI number: 15889425
Start: 2109546
End: 2110319
Strand: Reverse
Name: 15889425
Synonym: Atu2144
Alternate gene names: NA
Gene position: 2110319-2109546 (Counterclockwise)
Preceding gene: 159185073
Following gene: 159185071
Centisome position: 74.27
GC content: 58.91
Gene sequence:
>774_bases ATGACGGTGCGTTCACGGTTTTTCACAGAAGCGGAGGGGAAGGCTGTCGGCGTCGAGAATGCGGCGGCGAAGGGCGATGT TCTTCTTGTCTGTGAACATGCCTCCGCCACCATTCCGCAGAAATACGGCACGTTGGGTCTTTCGGCGGATGTGCTTTCAA GCCATGCGGCCTGGGATCCGGGTGCTCTTGCCGTTGCCCGTCTGCTATCTGAAAAATTCCACGCCACGCTTGTCTATCAA CGGTTTTCGCGTCTGGTCTATGATTGCAACCGCCCGCCCGAATCGCCTTCCGCGATGCCGGTGAAGAGCGAGATTTACGA TATTCCCGGCAATTTCGATCTCGATGAAGCGGAACGTTTCGCGCGCACGTCGGCGCTTTACGTGCCGTTTCATGACCGCG TGAGCGAGATCATCGCGGAGCGGCAGGCCGCCGGCCGCAAGGTGGTGGTGGTGACCATCCACAGTTTTACGCCGGTTTAT CACGGCCGGTTCCGCGAGGTTGAAATCGGCATTCTGCACGATAACGACAGCCGCCTGGCGGACGCGATGCTGGCGGGTGC CGAAGGGGCCTCGCTGACGGTCAGGCGCAACGACCCTTACGGGCCGGAAGACGGTGTGACACATACGCTGCGGCTGCATG CGCTGCCGGACGGTCTTTTGAATGTCATGATCGAAATCCGCAACGATCTCATCGCCAATGAAGGGGAACAGGCGGCTATT GCCGGTTTCCTCCACGAACTTATGGGGAAAGCGCTCTCATCGATTGAAGAGTGA
Upstream 100 bases:
>100_bases AAAATGAAGAGAAAATTTCAAATTCCATTTGACACTCGCGATAATGTGAAGAATTCTTTTCGTCATTGGCGGGATAGCGG GTTTCCGGGCGGGGTCGTGC
Downstream 100 bases:
>100_bases GGGAGCAAGGGCTGGCCGATGGTGAAGACACCGGGGCCGCCGTCAAAGGAGACTGCCGCCATTCGATAAAGCCGGCCAGA GAAGCCGGAAAGACGCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTVRSRFFTEAEGKAVGVENAAAKGDVLLVCEHASATIPQKYGTLGLSADVLSSHAAWDPGALAVARLLSEKFHATLVYQ RFSRLVYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERFARTSALYVPFHDRVSEIIAERQAAGRKVVVVTIHSFTPVY HGRFREVEIGILHDNDSRLADAMLAGAEGASLTVRRNDPYGPEDGVTHTLRLHALPDGLLNVMIEIRNDLIANEGEQAAI AGFLHELMGKALSSIEE
Sequences:
>Translated_257_residues MTVRSRFFTEAEGKAVGVENAAAKGDVLLVCEHASATIPQKYGTLGLSADVLSSHAAWDPGALAVARLLSEKFHATLVYQ RFSRLVYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERFARTSALYVPFHDRVSEIIAERQAAGRKVVVVTIHSFTPVY HGRFREVEIGILHDNDSRLADAMLAGAEGASLTVRRNDPYGPEDGVTHTLRLHALPDGLLNVMIEIRNDLIANEGEQAAI AGFLHELMGKALSSIEE >Mature_256_residues TVRSRFFTEAEGKAVGVENAAAKGDVLLVCEHASATIPQKYGTLGLSADVLSSHAAWDPGALAVARLLSEKFHATLVYQR FSRLVYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERFARTSALYVPFHDRVSEIIAERQAAGRKVVVVTIHSFTPVYH GRFREVEIGILHDNDSRLADAMLAGAEGASLTVRRNDPYGPEDGVTHTLRLHALPDGLLNVMIEIRNDLIANEGEQAAIA GFLHELMGKALSSIEE
Specific function: Unknown
COG id: COG3931
COG function: function code E; Predicted N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28065; Mature: 27934
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRSRFFTEAEGKAVGVENAAAKGDVLLVCEHASATIPQKYGTLGLSADVLSSHAAWDP CCCCHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHCCCCCCC GALAVARLLSEKFHATLVYQRFSRLVYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHH ARTSALYVPFHDRVSEIIAERQAAGRKVVVVTIHSFTPVYHGRFREVEIGILHDNDSRLA HHHCEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHCCCEEEEEEEEEECCCHHHH DAMLAGAEGASLTVRRNDPYGPEDGVTHTLRLHALPDGLLNVMIEIRNDLIANEGEQAAI HHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHH AGFLHELMGKALSSIEE HHHHHHHHHHHHHHHCC >Mature Secondary Structure TVRSRFFTEAEGKAVGVENAAAKGDVLLVCEHASATIPQKYGTLGLSADVLSSHAAWDP CCCHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHCCCCCCC GALAVARLLSEKFHATLVYQRFSRLVYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHH ARTSALYVPFHDRVSEIIAERQAAGRKVVVVTIHSFTPVYHGRFREVEIGILHDNDSRLA HHHCEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHCCCEEEEEEEEEECCCHHHH DAMLAGAEGASLTVRRNDPYGPEDGVTHTLRLHALPDGLLNVMIEIRNDLIANEGEQAAI HHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHH AGFLHELMGKALSSIEE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA