Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mltB [H]
Identifier: 15889403
GI number: 15889403
Start: 2085717
End: 2086943
Strand: Direct
Name: mltB [H]
Synonym: Atu2122
Alternate gene names: 15889403
Gene position: 2085717-2086943 (Clockwise)
Preceding gene: 159185057
Following gene: 159185060
Centisome position: 73.4
GC content: 61.53
Gene sequence:
>1227_bases ATGCCCACCTTCCGGTCGCGCAGCATCGTTTTTGCCGCCGCTTTGTCGCTTCTCTCCGCCGGCTCCGCCCTTGCCACGCC GCCTGTGGCTTCGCCTGACGATCCAAAGCAGGTTGCCTGTGGTGGTGATCTCGGCGCATTTCTCGAGGGCGTGAAGGCCG AGGCCGTTGCCAAGGGCGTTCCAGCCGCTGCCATCGAAAAGGCGCTGGCCGGCGCTCAGATTGACCCGAAAGTGCTTTCG CGTGACCGCGCCCAGGGCGTCTTCCGCCAGACCTTCCTGGAATTCTCCCAGCGCACCGTCAGCCAGGCGCGTCTCGATAT CGGCCGCAAGAAGCTGCAGGAACTCTCCTCCACCTTCGCCCGCGCCGAAAATGAGTTCGGTGTACCGGCCGGCGTCATCG CCGCCTTCTGGGCCATGGAAACCGATTTCGGCGCCGTTCAGGGCGATTTCAACACCCGCAACGCACTGGTGACCCTGTCG CATGATTGCCGCCGCCCGGAACTTTTCCGCCCGCAGCTGCTGGCGCTGATCGAAATGGTCCAGCACGGCGATCTCGACCC AGCCACCAATACGGGCGCATGGGCCGGCGAAATCGGCCAGGTGCAGATGCTGCCCAAGGACATCATCGCCTTTGGTGTCG ATGGTGATGGCAACGGTCATATCAACGTCAAGGACAGCGCCCCGGATGCGATCCTGACAGCCGCGAAATTTATCCAGCAC CTCGGCTTCAAGAAGGGCGAACCCTGGATGCAGGAAGTTTCCGTACCGGAAAACCTGCCCTGGGAAAAATCCGGCCTTGG CGGGTCCCTGACCGCCGGCGACTGGTTTGCGCTTGGCGTGACCCCACGCGACGGCAATAAAAATTTTGCCTCCCTACCCG CGGCCCTTATCATGCCGCAGGGCCGCAAGGGACCGACCTTCATTACCTATCCCAACTTCAATATCTATCTGGAATGGAAC CAGTCGTTTATCTACACGACCTCGGCCGCCTATTTCGCCAACCGCCTGATGGGCGCGCCGGTCTATAACAAGGGCAATCC CGATCCGGGCTTCGATGATGCCACGATGAAAGAGTTGCAGACCAAGCTTGAAGCGCGTGGCCACGATGTCGGCAAGGTGG ATGGAATTCTCGGTTCCGGCACCCGCGTCGCTATCCAGAAGGAACAGCAGCGCCTCGGAATGCCCGCAGACGGATGGCCG ACCCAGGCACTTCTCCAGGCGCTTTAA
Upstream 100 bases:
>100_bases GAAAAATCGGCGTTGTTCTGCAACGCCAGATCGTCCGGTCCGTTTTTTTGTCGCAAACATATGGGTAAAGCGGGCCAACA ACCTATCGAGGAAATTCCCC
Downstream 100 bases:
>100_bases CCTGGGTTAATCGCACTACCGGGCCTTTAATCTATCGGCCGGAATCAAGGCGCAAACTGTTAATCTCGACCGGGTGACTG GGGATAACACCCCGGTCATT
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPTFRSRSIVFAAALSLLSAGSALATPPVASPDDPKQVACGGDLGAFLEGVKAEAVAKGVPAAAIEKALAGAQIDPKVLS RDRAQGVFRQTFLEFSQRTVSQARLDIGRKKLQELSSTFARAENEFGVPAGVIAAFWAMETDFGAVQGDFNTRNALVTLS HDCRRPELFRPQLLALIEMVQHGDLDPATNTGAWAGEIGQVQMLPKDIIAFGVDGDGNGHINVKDSAPDAILTAAKFIQH LGFKKGEPWMQEVSVPENLPWEKSGLGGSLTAGDWFALGVTPRDGNKNFASLPAALIMPQGRKGPTFITYPNFNIYLEWN QSFIYTTSAAYFANRLMGAPVYNKGNPDPGFDDATMKELQTKLEARGHDVGKVDGILGSGTRVAIQKEQQRLGMPADGWP TQALLQAL
Sequences:
>Translated_408_residues MPTFRSRSIVFAAALSLLSAGSALATPPVASPDDPKQVACGGDLGAFLEGVKAEAVAKGVPAAAIEKALAGAQIDPKVLS RDRAQGVFRQTFLEFSQRTVSQARLDIGRKKLQELSSTFARAENEFGVPAGVIAAFWAMETDFGAVQGDFNTRNALVTLS HDCRRPELFRPQLLALIEMVQHGDLDPATNTGAWAGEIGQVQMLPKDIIAFGVDGDGNGHINVKDSAPDAILTAAKFIQH LGFKKGEPWMQEVSVPENLPWEKSGLGGSLTAGDWFALGVTPRDGNKNFASLPAALIMPQGRKGPTFITYPNFNIYLEWN QSFIYTTSAAYFANRLMGAPVYNKGNPDPGFDDATMKELQTKLEARGHDVGKVDGILGSGTRVAIQKEQQRLGMPADGWP TQALLQAL >Mature_407_residues PTFRSRSIVFAAALSLLSAGSALATPPVASPDDPKQVACGGDLGAFLEGVKAEAVAKGVPAAAIEKALAGAQIDPKVLSR DRAQGVFRQTFLEFSQRTVSQARLDIGRKKLQELSSTFARAENEFGVPAGVIAAFWAMETDFGAVQGDFNTRNALVTLSH DCRRPELFRPQLLALIEMVQHGDLDPATNTGAWAGEIGQVQMLPKDIIAFGVDGDGNGHINVKDSAPDAILTAAKFIQHL GFKKGEPWMQEVSVPENLPWEKSGLGGSLTAGDWFALGVTPRDGNKNFASLPAALIMPQGRKGPTFITYPNFNIYLEWNQ SFIYTTSAAYFANRLMGAPVYNKGNPDPGFDDATMKELQTKLEARGHDVGKVDGILGSGTRVAIQKEQQRLGMPADGWPT QALLQAL
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=243, Percent_Identity=28.3950617283951, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 43753; Mature: 43622
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFRSRSIVFAAALSLLSAGSALATPPVASPDDPKQVACGGDLGAFLEGVKAEAVAKGV CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC PAAAIEKALAGAQIDPKVLSRDRAQGVFRQTFLEFSQRTVSQARLDIGRKKLQELSSTFA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAENEFGVPAGVIAAFWAMETDFGAVQGDFNTRNALVTLSHDCRRPELFRPQLLALIEMV HCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH QHGDLDPATNTGAWAGEIGQVQMLPKDIIAFGVDGDGNGHINVKDSAPDAILTAAKFIQH HCCCCCCCCCCCCCCCCCCEEEECCHHHEEEECCCCCCCEEEECCCCCHHHHHHHHHHHH LGFKKGEPWMQEVSVPENLPWEKSGLGGSLTAGDWFALGVTPRDGNKNFASLPAALIMPQ HCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCHHEECCC GRKGPTFITYPNFNIYLEWNQSFIYTTSAAYFANRLMGAPVYNKGNPDPGFDDATMKELQ CCCCCEEEECCCEEEEEEECCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH TKLEARGHDVGKVDGILGSGTRVAIQKEQQRLGMPADGWPTQALLQAL HHHHHCCCCCCHHCCEECCCCEEEEEEHHHHCCCCCCCCCHHHHHHHC >Mature Secondary Structure PTFRSRSIVFAAALSLLSAGSALATPPVASPDDPKQVACGGDLGAFLEGVKAEAVAKGV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCC PAAAIEKALAGAQIDPKVLSRDRAQGVFRQTFLEFSQRTVSQARLDIGRKKLQELSSTFA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAENEFGVPAGVIAAFWAMETDFGAVQGDFNTRNALVTLSHDCRRPELFRPQLLALIEMV HCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH QHGDLDPATNTGAWAGEIGQVQMLPKDIIAFGVDGDGNGHINVKDSAPDAILTAAKFIQH HCCCCCCCCCCCCCCCCCCEEEECCHHHEEEECCCCCCCEEEECCCCCHHHHHHHHHHHH LGFKKGEPWMQEVSVPENLPWEKSGLGGSLTAGDWFALGVTPRDGNKNFASLPAALIMPQ HCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCHHEECCC GRKGPTFITYPNFNIYLEWNQSFIYTTSAAYFANRLMGAPVYNKGNPDPGFDDATMKELQ CCCCCEEEECCCEEEEEEECCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH TKLEARGHDVGKVDGILGSGTRVAIQKEQQRLGMPADGWPTQALLQAL HHHHHCCCCCCHHCCEECCCCEEEEEEHHHHCCCCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]