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The map label for this gene is 15889399

Identifier: 15889399

GI number: 15889399

Start: 2081194

End: 2082270

Strand: Direct

Name: 15889399

Synonym: Atu2117

Alternate gene names: NA

Gene position: 2081194-2082270 (Clockwise)

Preceding gene: 159185055

Following gene: 15889400

Centisome position: 73.24

GC content: 63.79

Gene sequence:

>1077_bases
ATGCGAAATTCGGGCAAATTCCGCGGAAGAAGTGCACTTCTTCTGTCTTCCACGGTGGGTCTGGCACTGGCACTAAGCGC
ATGCACCAGCGTCGAATATGCCGCGAAGGAAGGGCCGAACGGCCCGAAAATTGCAACAGTTACCTCTACCTCTTCGGCCC
AGACATCGACGCAACCAGCGACGGCTGAAGCCGTAGCGGGCGCCACCCCGGCAGCACCGGCAGTTCAGACCGCCGACGCC
GCAGCCTCTTCTCAAGCAGCAGCACTTCCCACCGCCGTCGCCGTCAAGGGCGGACGCGTGGCGCTGCCGCCTGCCTCCGA
AATTGCAGCCGCCGCAGCCATCGCCACGCAGATGCAGCAGCCGACCGAAGTGGCTGGAGCCGCAGCAACGACAGCCGCGC
CGACCACGGCCGCGGCACTTGTACCGACACACACCACGCCGGCGGCAGCAGCCATCGAAACGGCAAATGCGGCGGCAAAA
CCGGCCATGCACAATGCCGCCGTCGATCTGCCGCAGGTGGCTGCCGTCAAGGGCAGCTTCCCGGCCGCGCCGCCACCACC
CGGTTCGCCGTCCATCGGCACCGAGTTGACGGCGGAACGGAAAGTCATCCCGCTGCCGAAACCGGACAGCACGGTTCTCG
CTTATGCCGCCGGCCCGACCAATGCCGCGCTCGCCGCAATTCGCCAGAACGAATCAATGACGGCACCGCTCAGAACCGCA
CCGGCGGGACGCGAAAAGCTGAGTGGCCTGATTACCAAATACGCCACCATGTATGATGTGCCGGAAGATCTGGTTCACCG
CGTGGTGCAGCGCGAAAGCCGCTACAATCCCGGCGCCTATAGCCGCGGCAATTTCGGCCTGATGCAAATCCGGCATGCCA
CGGCCCGCTCCCTGGGCTTCGATGGCCCCGCCTCCGGCCTGTTCGATGCCGAAACCAATCTCAAATACGCCGTCAAATAT
TTGCGCGGCGCATGGGTTGTGGCGGGTAACGACCGTGACAATGCCGTCCGCCTTTATGCGCGCGGTTATTATTACGATGC
CAAGCGCAAGGGCATGCTGCACGTTCTGCGGAACTGA

Upstream 100 bases:

>100_bases
TGCCGCTTTCCTTACAATAGGTTAATGAAGGCGCGACGGGACACTGCCTGCTTCGCTTGACGCGGGGGTATCGAGAGACA
GGCATAACGAAGGCGGCAAC

Downstream 100 bases:

>100_bases
CGGCCTCTGCCTGTGCTGGAGACGCCGCGCAGCTGAGCGGCTTTTTTGAAAATGCTGCGGCTCCCTTCTGTCGTCATTCT
TGGGCTCGTCCCAGGGATCT

Product: lytic murein transglycosylase

Products: NA

Alternate protein names: Transglycosylase Protein; Transglycosylase; Lytic Murein Transglycosylase; Transglycosylase SLT Domain Protein; Soluble Lytic Transglycosylase; Soluble Lytic Murein Transglycosylase; Transglycosylase Slt Family; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing Protein

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRNSGKFRGRSALLLSSTVGLALALSACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPATAEAVAGATPAAPAVQTADA
AASSQAAALPTAVAVKGGRVALPPASEIAAAAAIATQMQQPTEVAGAAATTAAPTTAAALVPTHTTPAAAAIETANAAAK
PAMHNAAVDLPQVAAVKGSFPAAPPPPGSPSIGTELTAERKVIPLPKPDSTVLAYAAGPTNAALAAIRQNESMTAPLRTA
PAGREKLSGLITKYATMYDVPEDLVHRVVQRESRYNPGAYSRGNFGLMQIRHATARSLGFDGPASGLFDAETNLKYAVKY
LRGAWVVAGNDRDNAVRLYARGYYYDAKRKGMLHVLRN

Sequences:

>Translated_358_residues
MRNSGKFRGRSALLLSSTVGLALALSACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPATAEAVAGATPAAPAVQTADA
AASSQAAALPTAVAVKGGRVALPPASEIAAAAAIATQMQQPTEVAGAAATTAAPTTAAALVPTHTTPAAAAIETANAAAK
PAMHNAAVDLPQVAAVKGSFPAAPPPPGSPSIGTELTAERKVIPLPKPDSTVLAYAAGPTNAALAAIRQNESMTAPLRTA
PAGREKLSGLITKYATMYDVPEDLVHRVVQRESRYNPGAYSRGNFGLMQIRHATARSLGFDGPASGLFDAETNLKYAVKY
LRGAWVVAGNDRDNAVRLYARGYYYDAKRKGMLHVLRN
>Mature_358_residues
MRNSGKFRGRSALLLSSTVGLALALSACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPATAEAVAGATPAAPAVQTADA
AASSQAAALPTAVAVKGGRVALPPASEIAAAAAIATQMQQPTEVAGAAATTAAPTTAAALVPTHTTPAAAAIETANAAAK
PAMHNAAVDLPQVAAVKGSFPAAPPPPGSPSIGTELTAERKVIPLPKPDSTVLAYAAGPTNAALAAIRQNESMTAPLRTA
PAGREKLSGLITKYATMYDVPEDLVHRVVQRESRYNPGAYSRGNFGLMQIRHATARSLGFDGPASGLFDAETNLKYAVKY
LRGAWVVAGNDRDNAVRLYARGYYYDAKRKGMLHVLRN

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36538; Mature: 36538

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSGKFRGRSALLLSSTVGLALALSACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPA
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
TAEAVAGATPAAPAVQTADAAASSQAAALPTAVAVKGGRVALPPASEIAAAAAIATQMQQ
HHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEEEECCCEEECCCHHHHHHHHHHHHHHCC
PTEVAGAAATTAAPTTAAALVPTHTTPAAAAIETANAAAKPAMHNAAVDLPQVAAVKGSF
CHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCHHHCCCHHHHHCCCCHHHHCCCCC
PAAPPPPGSPSIGTELTAERKVIPLPKPDSTVLAYAAGPTNAALAAIRQNESMTAPLRTA
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCC
PAGREKLSGLITKYATMYDVPEDLVHRVVQRESRYNPGAYSRGNFGLMQIRHATARSLGF
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHCCC
DGPASGLFDAETNLKYAVKYLRGAWVVAGNDRDNAVRLYARGYYYDAKRKGMLHVLRN
CCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHCC
>Mature Secondary Structure
MRNSGKFRGRSALLLSSTVGLALALSACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPA
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
TAEAVAGATPAAPAVQTADAAASSQAAALPTAVAVKGGRVALPPASEIAAAAAIATQMQQ
HHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEEEECCCEEECCCHHHHHHHHHHHHHHCC
PTEVAGAAATTAAPTTAAALVPTHTTPAAAAIETANAAAKPAMHNAAVDLPQVAAVKGSF
CHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCHHHCCCHHHHHCCCCHHHHCCCCC
PAAPPPPGSPSIGTELTAERKVIPLPKPDSTVLAYAAGPTNAALAAIRQNESMTAPLRTA
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCC
PAGREKLSGLITKYATMYDVPEDLVHRVVQRESRYNPGAYSRGNFGLMQIRHATARSLGF
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHCCC
DGPASGLFDAETNLKYAVKYLRGAWVVAGNDRDNAVRLYARGYYYDAKRKGMLHVLRN
CCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA