Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889388
Identifier: 15889388
GI number: 15889388
Start: 2070143
End: 2070739
Strand: Direct
Name: 15889388
Synonym: Atu2105
Alternate gene names: NA
Gene position: 2070143-2070739 (Clockwise)
Preceding gene: 159185049
Following gene: 159185054
Centisome position: 72.85
GC content: 58.29
Gene sequence:
>597_bases ATGCATCTGGACGTGACAGAACATCCGCGTCTTGCCCTGGGCACGATTGCCGCGATAGGCCTTTTTATGGCTTTTTCAAC CGAGGAAGAGGTCCTCTACACCTCCGTTGACAAGTGCGTCGCCTCAGGCGTTTATCCCAAGGCTTGCCAAGCGGCATCCG AAGACGCCAACCAGCATCACCTCGCCACGGCACCGAGATTTCGCAACATGGTCGCATGCGAAATGGAATATGGTGCGGGT AATTGCGCTCAGCTGAGACAGAGCGTCAATTCCGACAATTCCAGCAGCACGAGCGCTTTCGTCCCTTCACCGGCCGGATT TGTGATGCCCCGATCCGTCGAAAACTTTTCAGACTACAGTGAATATCGTCGCCGTCAGCAAAACAACGAGTCTGGTTCCG CGGGTGCGATGTCGGCCTATCGAAAACGCAACGGCGACCTCGTCACACCGGACGTGAGTGCCGGCCAACAGAACAACGGC GGAGGCGGAGGCGCTGCAGGAGGCGGCGCGCTGGCCAATGATGTGAAGACGCTCAACGCCAAAACGAACGTCAAGGGCCG CGGCGGATTCGGCGGCCACTCCTTTTCCGGAAGCTGA
Upstream 100 bases:
>100_bases AATCACGGAGGGTAATGTCGCGGCCGGGCTCTGGAGCGGCGGCATCGCCGTGGTCATCGGGACTTTGAATGCCGCCTGCA TGGCGTATTGAGGAACAGAC
Downstream 100 bases:
>100_bases CATGCGCCGCATCACAGTACCACCGCGCCCGGATTGGCGCGAAAAAGCCAATGCCGTGGGTTTCTCCTTCCATGAAATGC ACGGCGAACCTTACTGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MHLDVTEHPRLALGTIAAIGLFMAFSTEEEVLYTSVDKCVASGVYPKACQAASEDANQHHLATAPRFRNMVACEMEYGAG NCAQLRQSVNSDNSSSTSAFVPSPAGFVMPRSVENFSDYSEYRRRQQNNESGSAGAMSAYRKRNGDLVTPDVSAGQQNNG GGGGAAGGGALANDVKTLNAKTNVKGRGGFGGHSFSGS
Sequences:
>Translated_198_residues MHLDVTEHPRLALGTIAAIGLFMAFSTEEEVLYTSVDKCVASGVYPKACQAASEDANQHHLATAPRFRNMVACEMEYGAG NCAQLRQSVNSDNSSSTSAFVPSPAGFVMPRSVENFSDYSEYRRRQQNNESGSAGAMSAYRKRNGDLVTPDVSAGQQNNG GGGGAAGGGALANDVKTLNAKTNVKGRGGFGGHSFSGS >Mature_198_residues MHLDVTEHPRLALGTIAAIGLFMAFSTEEEVLYTSVDKCVASGVYPKACQAASEDANQHHLATAPRFRNMVACEMEYGAG NCAQLRQSVNSDNSSSTSAFVPSPAGFVMPRSVENFSDYSEYRRRQQNNESGSAGAMSAYRKRNGDLVTPDVSAGQQNNG GGGGAAGGGALANDVKTLNAKTNVKGRGGFGGHSFSGS
Specific function: Unknown
COG id: COG5463
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20692; Mature: 20692
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLDVTEHPRLALGTIAAIGLFMAFSTEEEVLYTSVDKCVASGVYPKACQAASEDANQHH CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC LATAPRFRNMVACEMEYGAGNCAQLRQSVNSDNSSSTSAFVPSPAGFVMPRSVENFSDYS CCCCHHHHCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHH EYRRRQQNNESGSAGAMSAYRKRNGDLVTPDVSAGQQNNGGGGGAAGGGALANDVKTLNA HHHHHHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC KTNVKGRGGFGGHSFSGS CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHLDVTEHPRLALGTIAAIGLFMAFSTEEEVLYTSVDKCVASGVYPKACQAASEDANQHH CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC LATAPRFRNMVACEMEYGAGNCAQLRQSVNSDNSSSTSAFVPSPAGFVMPRSVENFSDYS CCCCHHHHCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHH EYRRRQQNNESGSAGAMSAYRKRNGDLVTPDVSAGQQNNGGGGGAAGGGALANDVKTLNA HHHHHHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC KTNVKGRGGFGGHSFSGS CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA