Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15889336

Identifier: 15889336

GI number: 15889336

Start: 2007792

End: 2008298

Strand: Direct

Name: 15889336

Synonym: Atu8171

Alternate gene names: NA

Gene position: 2007792-2008298 (Clockwise)

Preceding gene: 15889328

Following gene: 159185027

Centisome position: 70.66

GC content: 54.83

Gene sequence:

>507_bases
ATGGGGCAGGATCATATCCGTTACGACATTCTCGCACAGGATGCCCTTCGCGGCGTTATTCGTAAGGTTTTGGGTGAAGT
GGCCGCTACCGGCCGCCTGCCCGGCGACCATCACTTCTTCATCACCTTCCTGACCGGCGCGCCGGGCGTGCGGATTTCCC
AGCACCTCAAGTCGAAATACGCCGAACAGATGACCATCGTCATCCAGCACCAGTTCTGGGATATGAAGGTGACGGAAACC
GGATTCGAAATCGGCCTCTCCTTCTCCGATACGCCGGAAAAGCTTGTTATTCCCTACAATGCCATCAGAGGCTTCTACGA
TCCTTCCGTCAATTTCGAGCTTGAGTTCGATGTGCCTCTGGCCGAAGAGGAAGAAATGGAAGAAGCGGAAATCACCGCTT
ACCCCGTTTCCCACGAGGCGAAGCCCGCTTCCGAAACACCCAAATCGGGTGAGGAAAAGAAGGAAGGCTCCGTCGTTTCG
CTGGATGCTTTCCGCAAGAAGCAATAA

Upstream 100 bases:

>100_bases
GCTCAAGGATTGCGCGAAGATTCAAAGTGTTACAGCGTCCCGGGCGCGCAAGCCGCGCCACGCATGAAAAGACGTTCGAA
TAAGGGAAAGACAGGACCGC

Downstream 100 bases:

>100_bases
CGGCTTCTGCCCCAAGCCTTTTGAAACCCAGCCTCGTGAAACTCAAGGAGACATATCCCCATGGCGGCCGATATCGTCAA
TCTGCGTCAGTTTCGCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAEQMTIVIQHQFWDMKVTET
GFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPLAEEEEMEEAEITAYPVSHEAKPASETPKSGEEKKEGSVVS
LDAFRKKQ

Sequences:

>Translated_168_residues
MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAEQMTIVIQHQFWDMKVTET
GFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPLAEEEEMEEAEITAYPVSHEAKPASETPKSGEEKKEGSVVS
LDAFRKKQ
>Mature_167_residues
GQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAEQMTIVIQHQFWDMKVTETG
FEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPLAEEEEMEEAEITAYPVSHEAKPASETPKSGEEKKEGSVVSL
DAFRKKQ

Specific function: Unknown

COG id: COG3814

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18900; Mature: 18768

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
AEQMTIVIQHQFWDMKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPL
HHHEEEEEEEECCCEEEECCCEEEEEECCCCCCEEEECHHHHCCCCCCCCCEEEEECCCC
AEEEEMEEAEITAYPVSHEAKPASETPKSGEEKKEGSVVSLDAFRKKQ
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCC
>Mature Secondary Structure 
GQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY
CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
AEQMTIVIQHQFWDMKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPL
HHHEEEEEEEECCCEEEECCCEEEEEECCCCCCEEEECHHHHCCCCCCCCCEEEEECCCC
AEEEEMEEAEITAYPVSHEAKPASETPKSGEEKKEGSVVSLDAFRKKQ
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA