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The map label for this gene is fucU [H]

Identifier: 15889304

GI number: 15889304

Start: 1978879

End: 1979328

Strand: Direct

Name: fucU [H]

Synonym: Atu2016

Alternate gene names: 15889304

Gene position: 1978879-1979328 (Clockwise)

Preceding gene: 15889298

Following gene: 159185013

Centisome position: 69.64

GC content: 59.11

Gene sequence:

>450_bases
ATGTTGAAAAATATCGACCCGGCGCTGAATGCCGATGTTCTGCACGCGCTGCGCGCCATGGGTCACGGCGATACGCTGGT
GATATCGGACACCAACTTCCCGTCCGATTCGGTTGCCCGGCAAACGACGGTCGGCAAGGTGCTGCATATTGACAATGTCT
CGGCCGCCCGCGCCATGAAAGCAATCCTGTCCGTGCTGCCGCTCGACACGCCGTTGCAGCCTTCGGTCGGCCGCATGGAA
GTGATGGGCGCACCCGATCAGCTGGAACCGGTCCAGGTCGAAGTGCAGCAGGAAATCGACGCGGCCGAGGGAAAGTCCGC
TCCCATGTATGGCATCGAGCGTTTTGCTTTCTACGAAAAGGCCAAGCAGGCCTATTGCGTCATCACCACAGGCGAGACGC
GGTTTTATGGATGCTTTCTGCTGACCAAGGGTGTCATCCCGCCAAAGTGA

Upstream 100 bases:

>100_bases
GGCTTAACAATCTTCCGTTTGCGATTGACGCCGCACGCTTTTCCGGCTGGATTGCGCGCCGGTGCCGCAGACGGCATGAC
CATGAAGGGAGTTCGAAGAC

Downstream 100 bases:

>100_bases
GCGGTTATTGGTAATGGAAGCGGCACTGAATGACTTCCAGCCGTTGCTCGCTTCCGGACCCGGATACACGGTAGACAAAC
CGATGCTCGGCGGTAATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLKNIDPALNADVLHALRAMGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAMKAILSVLPLDTPLQPSVGRME
VMGAPDQLEPVQVEVQQEIDAAEGKSAPMYGIERFAFYEKAKQAYCVITTGETRFYGCFLLTKGVIPPK

Sequences:

>Translated_149_residues
MLKNIDPALNADVLHALRAMGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAMKAILSVLPLDTPLQPSVGRME
VMGAPDQLEPVQVEVQQEIDAAEGKSAPMYGIERFAFYEKAKQAYCVITTGETRFYGCFLLTKGVIPPK
>Mature_149_residues
MLKNIDPALNADVLHALRAMGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAMKAILSVLPLDTPLQPSVGRME
VMGAPDQLEPVQVEVQQEIDAAEGKSAPMYGIERFAFYEKAKQAYCVITTGETRFYGCFLLTKGVIPPK

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=148, Percent_Identity=35.8108108108108, Blast_Score=94, Evalue=3e-20,
Organism=Homo sapiens, GI148596951, Length=133, Percent_Identity=33.8345864661654, Blast_Score=78, Evalue=3e-15,
Organism=Escherichia coli, GI1789169, Length=150, Percent_Identity=37.3333333333333, Blast_Score=90, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16159; Mature: 16159

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIDPALNADVLHALRAMGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAMK
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCEEEEECCCHHHHHHH
AILSVLPLDTPLQPSVGRMEVMGAPDQLEPVQVEVQQEIDAAEGKSAPMYGIERFAFYEK
HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHH
AKQAYCVITTGETRFYGCFLLTKGVIPPK
CCCEEEEEECCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MLKNIDPALNADVLHALRAMGHGDTLVISDTNFPSDSVARQTTVGKVLHIDNVSAARAMK
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCEEEEECCCHHHHHHH
AILSVLPLDTPLQPSVGRMEVMGAPDQLEPVQVEVQQEIDAAEGKSAPMYGIERFAFYEK
HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHH
AKQAYCVITTGETRFYGCFLLTKGVIPPK
CCCEEEEEECCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA