Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889210
Identifier: 15889210
GI number: 15889210
Start: 1893679
End: 1894029
Strand: Direct
Name: 15889210
Synonym: Atu1916
Alternate gene names: NA
Gene position: 1893679-1894029 (Clockwise)
Preceding gene: 15889207
Following gene: 159184979
Centisome position: 66.64
GC content: 60.68
Gene sequence:
>351_bases ATGCATCTGAAACCCACCCTCCTCGCCTCTGGCATCCTTTTCGCCACCTCCCTCCTTTCACCGGCCAGCGCGGCAAGCTT CGATTGCACCAAGAGCGATCTGGCGGCCGATGAAAAAGCGATCTGCGACAACCGCGCGCTGAACGACCAGGACGTGAAGA TGGCCACCACCTTCGACATCCTAACCCAGCTGATGGCGATGGGCGCGCGCGATACCTTGCGCGACGAACAGAGCAAATGG CTGAAGAAACGTCAGGAATGCGCAGCCGATGTCGCCTGCCTGACGGGGGCCTATGAGGAACGCATGAAGCGCCTCGGCGA AGCGTTCCAGAGCATCAACCGTCCGCTCTGA
Upstream 100 bases:
>100_bases TGGCCACACTTATCCCGGCAGAGATCGGCCGGCGCAATTGGAACCAACAGCATCCATTTTTGGTTTCAGCCGACAAGACT GTCCTTAGAAGAGACGATCC
Downstream 100 bases:
>100_bases GCGTCATCGCCTGCCTCACACCGCACGGATGATGTCTTCCATGAGACCATGCAGCTGGTCGCGATAACCGGTTCTGGCCG AAGGCGCATCCTCGCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MHLKPTLLASGILFATSLLSPASAASFDCTKSDLAADEKAICDNRALNDQDVKMATTFDILTQLMAMGARDTLRDEQSKW LKKRQECAADVACLTGAYEERMKRLGEAFQSINRPL
Sequences:
>Translated_116_residues MHLKPTLLASGILFATSLLSPASAASFDCTKSDLAADEKAICDNRALNDQDVKMATTFDILTQLMAMGARDTLRDEQSKW LKKRQECAADVACLTGAYEERMKRLGEAFQSINRPL >Mature_116_residues MHLKPTLLASGILFATSLLSPASAASFDCTKSDLAADEKAICDNRALNDQDVKMATTFDILTQLMAMGARDTLRDEQSKW LKKRQECAADVACLTGAYEERMKRLGEAFQSINRPL
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12771; Mature: 12771
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLKPTLLASGILFATSLLSPASAASFDCTKSDLAADEKAICDNRALNDQDVKMATTFDI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LTQLMAMGARDTLRDEQSKWLKKRQECAADVACLTGAYEERMKRLGEAFQSINRPL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHLKPTLLASGILFATSLLSPASAASFDCTKSDLAADEKAICDNRALNDQDVKMATTFDI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LTQLMAMGARDTLRDEQSKWLKKRQECAADVACLTGAYEERMKRLGEAFQSINRPL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA