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The map label for this gene is yadH [H]

Identifier: 15889202

GI number: 15889202

Start: 1883622

End: 1884383

Strand: Reverse

Name: yadH [H]

Synonym: Atu1906

Alternate gene names: 15889202

Gene position: 1884383-1883622 (Counterclockwise)

Preceding gene: 15889203

Following gene: 15889196

Centisome position: 66.31

GC content: 55.25

Gene sequence:

>762_bases
ATGAATTTCGAAGCCATCAAGTCCATCTACCTGTTCGAAATGGCACGCACCCGCCGCACCCTGCTGCAGAGCGTGGTGTC
GCCCGTCATTTCCACGTCGCTTTATTTCATCGTGTTCGGAACGGCGATCGGTTCGCGGATTCAGGAAGTTGGCGGCGTTT
CCTACGGTGCGTTCATAACGCCCGGCCTCATCATGCTGACGCTTCTGACGCAATGTATCAGCAACGGCTCCTTCGGCATT
TATTTCCCGAAGTTCACCGGCACGGTCTACGAGATATTGTCGGCGCCGGTGTCGATGACGGAAATCGTCGCGGGTTATGT
CGGCGCTGCGGCGACCAAGGGGCTGATGATCGGCACGATCATCCTGATAACCGCGTCATTCTTCGTGGATATCACCATTG
CCCATCCGTTCATGATGGTGCTGTTCTTCGTGCTGACGGCTGTCAGTTTCAGCCTGTTCGGCTTCATCATAGGCATCTGG
GCGACGAATTTCGAGCAGCTGAACCTCATTCCCATGCTGGTGGTACCGCCGCTGACCTTCCTTGGCGGCAGCTTCTATTC
CATCGACATGCTGCCGCCCTTCTGGCAGACGGTCAGCCATTTCAATCCGGTGCTTTATCTCATCAGTGGTTTCCGCTGGA
GTTTTTATGAGATCGCCGACGTCAATCCGGTGATCAGCCTTGCGATGATCACGCTGTTTCTGGCGGTTTGCCTCGGTGTT
GTCGCCTGGATGTTTAAGACGGGTTATCGGCTTCGCAACTGA

Upstream 100 bases:

>100_bases
TCCTGGGCGCTCTTTCTGCCGCCAACATCCATTTCAAGGATATTTCGACGCGGCAAAGCTCGCTCGAGGATATCTTCGTT
TCGCTGGTCGGAGGCCAGAA

Downstream 100 bases:

>100_bases
CAGTACGGCCTACCTCCCTCATTCCTGTGCTCGTCACAGGAATCCAGCCGACGCGCGTCTGCGCGACGGGAAGACTCCTT
TCAGCCCAAGGACTTGGGCT

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNFEAIKSIYLFEMARTRRTLLQSVVSPVISTSLYFIVFGTAIGSRIQEVGGVSYGAFITPGLIMLTLLTQCISNGSFGI
YFPKFTGTVYEILSAPVSMTEIVAGYVGAAATKGLMIGTIILITASFFVDITIAHPFMMVLFFVLTAVSFSLFGFIIGIW
ATNFEQLNLIPMLVVPPLTFLGGSFYSIDMLPPFWQTVSHFNPVLYLISGFRWSFYEIADVNPVISLAMITLFLAVCLGV
VAWMFKTGYRLRN

Sequences:

>Translated_253_residues
MNFEAIKSIYLFEMARTRRTLLQSVVSPVISTSLYFIVFGTAIGSRIQEVGGVSYGAFITPGLIMLTLLTQCISNGSFGI
YFPKFTGTVYEILSAPVSMTEIVAGYVGAAATKGLMIGTIILITASFFVDITIAHPFMMVLFFVLTAVSFSLFGFIIGIW
ATNFEQLNLIPMLVVPPLTFLGGSFYSIDMLPPFWQTVSHFNPVLYLISGFRWSFYEIADVNPVISLAMITLFLAVCLGV
VAWMFKTGYRLRN
>Mature_253_residues
MNFEAIKSIYLFEMARTRRTLLQSVVSPVISTSLYFIVFGTAIGSRIQEVGGVSYGAFITPGLIMLTLLTQCISNGSFGI
YFPKFTGTVYEILSAPVSMTEIVAGYVGAAATKGLMIGTIILITASFFVDITIAHPFMMVLFFVLTAVSFSLFGFIIGIW
ATNFEQLNLIPMLVVPPLTFLGGSFYSIDMLPPFWQTVSHFNPVLYLISGFRWSFYEIADVNPVISLAMITLFLAVCLGV
VAWMFKTGYRLRN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=42.4, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27962; Mature: 27962

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEAIKSIYLFEMARTRRTLLQSVVSPVISTSLYFIVFGTAIGSRIQEVGGVSYGAFIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLIMLTLLTQCISNGSFGIYFPKFTGTVYEILSAPVSMTEIVAGYVGAAATKGLMIGTI
HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ILITASFFVDITIAHPFMMVLFFVLTAVSFSLFGFIIGIWATNFEQLNLIPMLVVPPLTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCHHH
LGGSFYSIDMLPPFWQTVSHFNPVLYLISGFRWSFYEIADVNPVISLAMITLFLAVCLGV
HCCCEEEECCCCHHHHHHHHCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH
VAWMFKTGYRLRN
HHHHHHCCCCCCC
>Mature Secondary Structure
MNFEAIKSIYLFEMARTRRTLLQSVVSPVISTSLYFIVFGTAIGSRIQEVGGVSYGAFIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLIMLTLLTQCISNGSFGIYFPKFTGTVYEILSAPVSMTEIVAGYVGAAATKGLMIGTI
HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ILITASFFVDITIAHPFMMVLFFVLTAVSFSLFGFIIGIWATNFEQLNLIPMLVVPPLTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCHHH
LGGSFYSIDMLPPFWQTVSHFNPVLYLISGFRWSFYEIADVNPVISLAMITLFLAVCLGV
HCCCEEEECCCCHHHHHHHHCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH
VAWMFKTGYRLRN
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]