Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888925

Identifier: 15888925

GI number: 15888925

Start: 1595156

End: 1595722

Strand: Reverse

Name: 15888925

Synonym: Atu8160

Alternate gene names: NA

Gene position: 1595722-1595156 (Counterclockwise)

Preceding gene: 159184838

Following gene: 159184837

Centisome position: 56.16

GC content: 62.08

Gene sequence:

>567_bases
ATGATCAAACTAGCGGGACTGGGCAAAGCTGCCGCTGCTTCGATCCTCATTTCCGGCATCGTGTTCGGTACTGCCGCACG
CGCGCAGGAAATTTCCGAAGCGCACATCGCTGCCGCACGCAAGGCAATCGCCTCTCTTGGCGTTACCGACCGTTTCGACG
ACATTCTGCCGGGTCTGGCCGAGCGCCTGAAGGGCGAACTCATTCAGGCCTCGCCGAATGTGCAGGACGCCATCACCACG
ACGGTTGATGCCAAGGCGCTTGAGCTTGCACCGCGCCGCGCCGATCTGGAACGCGAAGCGGCACTCACCTATGCGCGCGC
CTTCAGCGTTGACGAGCTGAATGCCATTTCCGCATTCTACAGCAGCGAAGCTGGCAAGAAGCTCCTCAAGGATGGCCCGA
TCGCCACGCGCGAACTGATGAAGGCTGCCGACATCTGGGCCGCCGGCATCAACCGCGATCTCAACACCGCCAGCATGACT
GAACTGCAGAAGGTTGCCGGCGCCGATCTGAAGCCGCTTCCGGCTGATCATAACGCTACCGGCGGCGCGCCCGCAGCCAA
GCCGTAA

Upstream 100 bases:

>100_bases
GTTGAGCACGGACTTTTCATAAATTTGGCATCGCTTGCCATCATCGCGGGCCCTGAAGGCGCCCGCATGATGCAGGCAGT
ATAACAGGAGCGAGATTTTC

Downstream 100 bases:

>100_bases
GGCGACCTTCAAAGGTTCAGAAATATTCAAAGCCCGGTCGCAAGACCGGGCTTTTCATTTGTGCGTCGCAGCACCTATAT
GTGGCGTGAACAGACCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MIKLAGLGKAAAASILISGIVFGTAARAQEISEAHIAAARKAIASLGVTDRFDDILPGLAERLKGELIQASPNVQDAITT
TVDAKALELAPRRADLEREAALTYARAFSVDELNAISAFYSSEAGKKLLKDGPIATRELMKAADIWAAGINRDLNTASMT
ELQKVAGADLKPLPADHNATGGAPAAKP

Sequences:

>Translated_188_residues
MIKLAGLGKAAAASILISGIVFGTAARAQEISEAHIAAARKAIASLGVTDRFDDILPGLAERLKGELIQASPNVQDAITT
TVDAKALELAPRRADLEREAALTYARAFSVDELNAISAFYSSEAGKKLLKDGPIATRELMKAADIWAAGINRDLNTASMT
ELQKVAGADLKPLPADHNATGGAPAAKP
>Mature_188_residues
MIKLAGLGKAAAASILISGIVFGTAARAQEISEAHIAAARKAIASLGVTDRFDDILPGLAERLKGELIQASPNVQDAITT
TVDAKALELAPRRADLEREAALTYARAFSVDELNAISAFYSSEAGKKLLKDGPIATRELMKAADIWAAGINRDLNTASMT
ELQKVAGADLKPLPADHNATGGAPAAKP

Specific function: Unknown

COG id: COG3184

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19529; Mature: 19529

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLAGLGKAAAASILISGIVFGTAARAQEISEAHIAAARKAIASLGVTDRFDDILPGLA
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ERLKGELIQASPNVQDAITTTVDAKALELAPRRADLEREAALTYARAFSVDELNAISAFY
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHCCHHHHHHHHHHH
SSEAGKKLLKDGPIATRELMKAADIWAAGINRDLNTASMTELQKVAGADLKPLPADHNAT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GGAPAAKP
CCCCCCCC
>Mature Secondary Structure
MIKLAGLGKAAAASILISGIVFGTAARAQEISEAHIAAARKAIASLGVTDRFDDILPGLA
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ERLKGELIQASPNVQDAITTTVDAKALELAPRRADLEREAALTYARAFSVDELNAISAFY
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHCCHHHHHHHHHHH
SSEAGKKLLKDGPIATRELMKAADIWAAGINRDLNTASMTELQKVAGADLKPLPADHNAT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GGAPAAKP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA