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The map label for this gene is crtB

Identifier: 15888879

GI number: 15888879

Start: 1547108

End: 1547953

Strand: Reverse

Name: crtB

Synonym: Atu1560

Alternate gene names: NA

Gene position: 1547953-1547108 (Counterclockwise)

Preceding gene: 15888880

Following gene: 159184814

Centisome position: 54.48

GC content: 61.94

Gene sequence:

>846_bases
ATGGAACCCACAGAAAATCTCGACGTCTGCCTCGCGACGCTGCGCGACACCGATCGTGACCGTTATCTCGCCTGCCTTTT
GTCGCCTGCCGACAAGCGCAATGCTCTGGCTGCCCTTTACGCCTTCAACGCCGAAATCGCCCGTATCCGCGATTCCGTGC
GCGAGGCGCTGCCGGGTGAGGTGCGTATGCAATGGTGGCGTGACCTTGTCGACGGCAATCCGCACGGTGACAGCCAATCC
CATCCGGTGGCCGCAGCGCTCCTGACGACGATCGAACACTATCGCCTGCCGCGCCCGGTGCTCGGCAATATGATCGAGGC
GCGTATCTTCGATCTCTATGACGATCTGTTCGAGGATCGCAACGCGCTTGAGGGATACGCCGGCGAAACCGCCTCGGCCC
TGATCCAGCTCGCAAGCCTCGTGCTTTCCGCCGAGGATGCCGCTCATAGCGCGGAAGCGGCGGGACATGCTGGTGTGGCC
CAGGCCATGGCCGGCATGCTGCTGCTCATGCCGCTTCACCGGCGTCGCGGACAGGTCTATATTCCCGCTGACATGCTGGC
CGCGGCTGGTCTTGATCGTGAAACCTTTCTTGCAGGTCAGGACAGGCAGCGTATCGGCATCGCCGTTGAAATTTTCGCCG
CTCATGCGCTCGATCATATCGAGAAGGCAAGACGCGCGACGATCTCGAAAAACCTCTTTGCCGCCTATCTGCCCGTCGCT
TTGTCCGGCCCGGTCATCGCTGCCGCCAGGAAGGCGGGGGCAGGGGTGTTCGACGGCGACCTGCAATTGTCGCAGCTTCG
CCGGCAATGGTTGCTTGCGAAGGCCTCTTTCCTCAAGCGTTTCTGA

Upstream 100 bases:

>100_bases
CCGCGGTCCGGACCTATAATATCATCCTTTCGGAATCGCGCGCCGTAGCCGCGGCGCTGATTGCCGTCGAAGGCTGAGGG
CGTTTCGCGCGCGGGGAACC

Downstream 100 bases:

>100_bases
TCACAGGGCGCCTGTCACCAGGAGCCACACTTCACGCAAGCCTCGAGCTTTATGAATCCAGATTGGGTTCGTGTCGTTTC
GAGTCGCGAATCGAAGGGTT

Product: phytoene synthase

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Squalene; Squalene And Phytoene Synthases Superfamily; Phytoene/Squalene Synthetase; Phytoene/Squalene Synthetase-Like Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MEPTENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGEVRMQWWRDLVDGNPHGDSQS
HPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDRNALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVA
QAMAGMLLLMPLHRRRGQVYIPADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARRATISKNLFAAYLPVA
LSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF

Sequences:

>Translated_281_residues
MEPTENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGEVRMQWWRDLVDGNPHGDSQS
HPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDRNALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVA
QAMAGMLLLMPLHRRRGQVYIPADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARRATISKNLFAAYLPVA
LSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF
>Mature_281_residues
MEPTENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGEVRMQWWRDLVDGNPHGDSQS
HPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDRNALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVA
QAMAGMLLLMPLHRRRGQVYIPADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARRATISKNLFAAYLPVA
LSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=255, Percent_Identity=30.5882352941176, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24641447, Length=280, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 30764; Mature: 30764

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPTENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGE
CCCCCHHHHHHHHHHCCCCHHEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VRMQWWRDLVDGNPHGDSQSHPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
NALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVAQAMAGMLLLMPLHRRRGQVY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE
IPADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARRATISKNLFAAYLPVA
ECHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF
HCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPTENLDVCLATLRDTDRDRYLACLLSPADKRNALAALYAFNAEIARIRDSVREALPGE
CCCCCHHHHHHHHHHCCCCHHEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VRMQWWRDLVDGNPHGDSQSHPVAAALLTTIEHYRLPRPVLGNMIEARIFDLYDDLFEDR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
NALEGYAGETASALIQLASLVLSAEDAAHSAEAAGHAGVAQAMAGMLLLMPLHRRRGQVY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE
IPADMLAAAGLDRETFLAGQDRQRIGIAVEIFAAHALDHIEKARRATISKNLFAAYLPVA
ECHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGPVIAAARKAGAGVFDGDLQLSQLRRQWLLAKASFLKRF
HCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA