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The map label for this gene is 15888874

Identifier: 15888874

GI number: 15888874

Start: 1542378

End: 1542803

Strand: Reverse

Name: 15888874

Synonym: Atu1553

Alternate gene names: NA

Gene position: 1542803-1542378 (Counterclockwise)

Preceding gene: 159184814

Following gene: 159184809

Centisome position: 54.29

GC content: 52.58

Gene sequence:

>426_bases
ATGTTAGCTTTTGTCAGGAAAAAATGTCTGGAGGTTTTCGTGCTGGGGGACAAGACGGATTCAGACAATGCGCTCGGCTA
TTACATGTGGAGCATTTCCGACAACCGGCTGATCATGGATGCGGTCACCGCGGAATGTCATGGGTTTTCCCAAGAGGTTG
CGTCACGCGGGGTGACGATCGAAGAGATTCTCGAGAGAATCGATTTCGAAATGCGCGATCAGGTGGCGCAGGCAATTTTT
GAGAGCATCACGAGAGGGGTATTTTTCGATCAGCGTTACAAGGTTCATCTGCCTGATGGTTCGAGCCGGTGGATCGTGGC
GAAGGGCAGGGCGATTTTCGATGCTGACAATACGCCGTTTCTCGGCATTGGCAGCGTCCGGGATATTACCGTCAAGAAAG
CCTTTCAGTTCGAGCCCCGCCAGTAG

Upstream 100 bases:

>100_bases
GCGGATCAAACCGCGAATAAATTTCGGTGGATATCGATGCACGCTGCAGTAGTCGGACGGTTCCCCCTACAAAAACAAGG
GGTGGAATATTAGAGGTCTG

Downstream 100 bases:

>100_bases
AGATCAGGCCGGTGACGAATGCGCAAAAAAGGCGGCTTTCGCCGCCTTTCTCGTTTCGCTCCGCCGGGACATCAGAATAC
GGCGAGATATTTCAATAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLAFVRKKCLEVFVLGDKTDSDNALGYYMWSISDNRLIMDAVTAECHGFSQEVASRGVTIEEILERIDFEMRDQVAQAIF
ESITRGVFFDQRYKVHLPDGSSRWIVAKGRAIFDADNTPFLGIGSVRDITVKKAFQFEPRQ

Sequences:

>Translated_141_residues
MLAFVRKKCLEVFVLGDKTDSDNALGYYMWSISDNRLIMDAVTAECHGFSQEVASRGVTIEEILERIDFEMRDQVAQAIF
ESITRGVFFDQRYKVHLPDGSSRWIVAKGRAIFDADNTPFLGIGSVRDITVKKAFQFEPRQ
>Mature_141_residues
MLAFVRKKCLEVFVLGDKTDSDNALGYYMWSISDNRLIMDAVTAECHGFSQEVASRGVTIEEILERIDFEMRDQVAQAIF
ESITRGVFFDQRYKVHLPDGSSRWIVAKGRAIFDADNTPFLGIGSVRDITVKKAFQFEPRQ

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16091; Mature: 16091

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFVRKKCLEVFVLGDKTDSDNALGYYMWSISDNRLIMDAVTAECHGFSQEVASRGVTI
CCHHHHHHHEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEHHHHHCCCHHHHHHCCCCH
EEILERIDFEMRDQVAQAIFESITRGVFFDQRYKVHLPDGSSRWIVAKGRAIFDADNTPF
HHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCEEEEECCEEEECCCCCE
LGIGSVRDITVKKAFQFEPRQ
EECCCCCEEEEEHEECCCCCC
>Mature Secondary Structure
MLAFVRKKCLEVFVLGDKTDSDNALGYYMWSISDNRLIMDAVTAECHGFSQEVASRGVTI
CCHHHHHHHEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEHHHHHCCCHHHHHHCCCCH
EEILERIDFEMRDQVAQAIFESITRGVFFDQRYKVHLPDGSSRWIVAKGRAIFDADNTPF
HHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCEEEEECCEEEECCCCCE
LGIGSVRDITVKKAFQFEPRQ
EECCCCCEEEEEHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA