Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888866

Identifier: 15888866

GI number: 15888866

Start: 1535030

End: 1535995

Strand: Direct

Name: 15888866

Synonym: Atu1545

Alternate gene names: NA

Gene position: 1535030-1535995 (Clockwise)

Preceding gene: 159184807

Following gene: 15888869

Centisome position: 54.02

GC content: 60.25

Gene sequence:

>966_bases
ATGGACACAGACGCAGCCGCAAATGAAAACCGCCGCAAAGGTCGCATCGGCGGGCTGGATACCCTCAGGGGGCTCGCGCT
CCTCGCCATGGCGTCCTACCATTTCACATGGAATCTGGAATATTTCGGCTATCTCGAACCCGGTACGGCAACCACGGGTC
TCTGGAAGCTTTATGCGCGCGGCATCGCCAGCTCGTTCCTGTTTCTTGCAGGCTTCAGCCTGTTTCTCGCCCATGGCAGG
GGTCTGAACTGGCAGTCCTTCGGTAAGCGTTTTGCGATGGTGGCCGGCGCAGCCCTGCTCATCACCGTCGCCACCTATTT
CGCTTTTCCGGACAGTTTCATCTTCTTCGGCATATTGCACAATATCGCCGCCGCAAGCCTCGTCGGGCTACTGTTCCTGC
GGGCGCCCGCGCCCGTGACGCTGCTTTTCGCCGTCATTGCGTTCATCCTGCCGCAATATCTGCAGTCCGATATCTTCAAC
GCAAAATGGCTGGCCTGGATCGGCTTTTCCACCATGCCGCCGCGCTCGAATGACTACGTGCCGCTGCTGCCCTGGCTTGC
ACCCTTCCTCGGCGGCCTTGCGGTTTCCCAATTCGTCACGCCACGCGGTTGGCTTGATCGTTTTCGCAATCCAAGCGCGC
CGCGCAATCTCGTCGCCAGCGCCGGCCGCCATAGCCTCGCCTTCTACCTCATCCACCAGCCGGTGCTGATCGGCCTCGTT
TATACGCTCTCCCTCGTCGCCCCGCCTCCGCCGGTCGATCAGGTCGAGCTTTATAAATCAAGCTGCGAAAAAAGCTGCGT
CGAGCAGCCGAACGGGGCGGAACTCTGCCAGCGTTTCTGCGGCTGCACGCTGGAAAAGCTGCAGGCGGAAAATCTGTTCG
ACACGATGATGGAAGGCAAGCTCAGCGCGGATCAGCAGACGAAGGTCAGCGAAGTGGCGCAGCAGTGTACGGTTGAGGCG
CAGTAG

Upstream 100 bases:

>100_bases
GCCTTGAAATAGCCGCACTTAAAGGGCCAAGCCCACACGTCATTTCAAGCATATCCAAGTGAATGCCGGCCCCTCGAAAA
GCTGAAAAAAAGCGGAAAAC

Downstream 100 bases:

>100_bases
CCGTTGGCCTGCGAGACCGGCGAGCGTTCCCGTCAGACTCGGCGTCATCCTCGGGCTTGACCCGAGGATCTATCCACGTT
GCATAAAATCATACCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYARGIASSFLFLAGFSLFLAHGR
GLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILHNIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFN
AKWLAWIGFSTMPPRSNDYVPLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV
YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGKLSADQQTKVSEVAQQCTVEA
Q

Sequences:

>Translated_321_residues
MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYARGIASSFLFLAGFSLFLAHGR
GLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILHNIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFN
AKWLAWIGFSTMPPRSNDYVPLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV
YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGKLSADQQTKVSEVAQQCTVEA
Q
>Mature_321_residues
MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYARGIASSFLFLAGFSLFLAHGR
GLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILHNIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFN
AKWLAWIGFSTMPPRSNDYVPLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV
YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGKLSADQQTKVSEVAQQCTVEA
Q

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35332; Mature: 35332

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYAR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHH
GIASSFLFLAGFSLFLAHGRGLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFNAKWLAWIGFSTMPPRSNDYV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
PLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV
CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGK
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
LSADQQTKVSEVAQQCTVEAQ
CCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYAR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHH
GIASSFLFLAGFSLFLAHGRGLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFNAKWLAWIGFSTMPPRSNDYV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
PLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV
CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGK
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
LSADQQTKVSEVAQQCTVEAQ
CCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA