Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888866
Identifier: 15888866
GI number: 15888866
Start: 1535030
End: 1535995
Strand: Direct
Name: 15888866
Synonym: Atu1545
Alternate gene names: NA
Gene position: 1535030-1535995 (Clockwise)
Preceding gene: 159184807
Following gene: 15888869
Centisome position: 54.02
GC content: 60.25
Gene sequence:
>966_bases ATGGACACAGACGCAGCCGCAAATGAAAACCGCCGCAAAGGTCGCATCGGCGGGCTGGATACCCTCAGGGGGCTCGCGCT CCTCGCCATGGCGTCCTACCATTTCACATGGAATCTGGAATATTTCGGCTATCTCGAACCCGGTACGGCAACCACGGGTC TCTGGAAGCTTTATGCGCGCGGCATCGCCAGCTCGTTCCTGTTTCTTGCAGGCTTCAGCCTGTTTCTCGCCCATGGCAGG GGTCTGAACTGGCAGTCCTTCGGTAAGCGTTTTGCGATGGTGGCCGGCGCAGCCCTGCTCATCACCGTCGCCACCTATTT CGCTTTTCCGGACAGTTTCATCTTCTTCGGCATATTGCACAATATCGCCGCCGCAAGCCTCGTCGGGCTACTGTTCCTGC GGGCGCCCGCGCCCGTGACGCTGCTTTTCGCCGTCATTGCGTTCATCCTGCCGCAATATCTGCAGTCCGATATCTTCAAC GCAAAATGGCTGGCCTGGATCGGCTTTTCCACCATGCCGCCGCGCTCGAATGACTACGTGCCGCTGCTGCCCTGGCTTGC ACCCTTCCTCGGCGGCCTTGCGGTTTCCCAATTCGTCACGCCACGCGGTTGGCTTGATCGTTTTCGCAATCCAAGCGCGC CGCGCAATCTCGTCGCCAGCGCCGGCCGCCATAGCCTCGCCTTCTACCTCATCCACCAGCCGGTGCTGATCGGCCTCGTT TATACGCTCTCCCTCGTCGCCCCGCCTCCGCCGGTCGATCAGGTCGAGCTTTATAAATCAAGCTGCGAAAAAAGCTGCGT CGAGCAGCCGAACGGGGCGGAACTCTGCCAGCGTTTCTGCGGCTGCACGCTGGAAAAGCTGCAGGCGGAAAATCTGTTCG ACACGATGATGGAAGGCAAGCTCAGCGCGGATCAGCAGACGAAGGTCAGCGAAGTGGCGCAGCAGTGTACGGTTGAGGCG CAGTAG
Upstream 100 bases:
>100_bases GCCTTGAAATAGCCGCACTTAAAGGGCCAAGCCCACACGTCATTTCAAGCATATCCAAGTGAATGCCGGCCCCTCGAAAA GCTGAAAAAAAGCGGAAAAC
Downstream 100 bases:
>100_bases CCGTTGGCCTGCGAGACCGGCGAGCGTTCCCGTCAGACTCGGCGTCATCCTCGGGCTTGACCCGAGGATCTATCCACGTT GCATAAAATCATACCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYARGIASSFLFLAGFSLFLAHGR GLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILHNIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFN AKWLAWIGFSTMPPRSNDYVPLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGKLSADQQTKVSEVAQQCTVEA Q
Sequences:
>Translated_321_residues MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYARGIASSFLFLAGFSLFLAHGR GLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILHNIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFN AKWLAWIGFSTMPPRSNDYVPLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGKLSADQQTKVSEVAQQCTVEA Q >Mature_321_residues MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYARGIASSFLFLAGFSLFLAHGR GLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILHNIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFN AKWLAWIGFSTMPPRSNDYVPLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGKLSADQQTKVSEVAQQCTVEA Q
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35332; Mature: 35332
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHH GIASSFLFLAGFSLFLAHGRGLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH NIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFNAKWLAWIGFSTMPPRSNDYV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC PLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGK HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC LSADQQTKVSEVAQQCTVEAQ CCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTDAAANENRRKGRIGGLDTLRGLALLAMASYHFTWNLEYFGYLEPGTATTGLWKLYAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHH GIASSFLFLAGFSLFLAHGRGLNWQSFGKRFAMVAGAALLITVATYFAFPDSFIFFGILH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH NIAAASLVGLLFLRAPAPVTLLFAVIAFILPQYLQSDIFNAKWLAWIGFSTMPPRSNDYV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC PLLPWLAPFLGGLAVSQFVTPRGWLDRFRNPSAPRNLVASAGRHSLAFYLIHQPVLIGLV CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH YTLSLVAPPPPVDQVELYKSSCEKSCVEQPNGAELCQRFCGCTLEKLQAENLFDTMMEGK HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC LSADQQTKVSEVAQQCTVEAQ CCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA