Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is fixG [H]
Identifier: 15888854
GI number: 15888854
Start: 1522136
End: 1523719
Strand: Reverse
Name: fixG [H]
Synonym: Atu1530
Alternate gene names: 15888854
Gene position: 1523719-1522136 (Counterclockwise)
Preceding gene: 15888858
Following gene: 15888853
Centisome position: 53.62
GC content: 60.67
Gene sequence:
>1584_bases ATGAACATCTATCGCGCCGGACAGGATCGCCCGCAACAGCCCGTTGAAAGGCTGGAGGCGGAAGCCGTCAATTCCGCAAA AACGCGCAAACCGCTCTACGAAGCGCGCAAGAAGATTTTTCCCAAGCGCGCCGAGGGCCGGTTCCGGCGGTTCAAATGGC TGGTGATGCTGATCACGCTCGGCATTTATTATCTGACGCCGTTCCTGCGCTGGGACCGCGGGCCTTATGCGCCGGATCAG GCGGTGCTGATCGATATCGCCAACCGGCGCTTTTATTTCTTCTTCATTGAAATCTGGCCGCAGGAGTTCTTTTTCGTTGC GGGTCTGTTGGTCATGGCGGGGCTGGGGCTGTTTCTCGTGACCTCCGCCGTCGGGCGCGCATGGTGCGGGTATACCTGTC CGCAGACCGTCTGGGTCGACCTGTTTCTTGTCGTTGAACGGGCAATCGAGGGCGACAGGAACGCCCGCATGAAGCTGGAT GCGGCACCCTTCACATTCGGCAAATTGCGCAAGCGGGTGTTGAAACATGCAATCTGGCTGGTGATCGGCGTTTTGACCGG TGGTGCCTGGATTTTCTATTTCGCCGATGCGCCGACGCTGGCGATGCAGTTCATGACCGGGCAGGCGCCGATGATCGCCT ACTCGACCGTCGCCACGCTGACCGCCACCACCTATGTCTTCGGCGGGCTGATGCGGGAGCAGGTCTGCACCTATATGTGT CCCTGGCCGCGCATCCAGGCGGCGATGCTGGATGAGAATTCGCTTGTCGTCACCTATAATGACTGGCGCGGCGAACCGCG CTCGCGTCACGCCAAGAAGGCTGCGGCCGCCGGGGAGAGCATCGGCGATTGCGTCGATTGCAATGCCTGCGTCGCGGTCT GTCCCATGGGCATCGACATCAGGGACGGACAGCAGCTGGAATGCATTACCTGCGCACTGTGCATCGATGCCTGCGACGGG GTGATGGACAAGATCGGCAAGCCGCGCGGGCTGATCGCTTATGCGACGCTGTCGGAATATCAGTCCAACATGGCGCTGGC GACCGGCAACGGCGAATACGCCATCCGCCCCGCCAATGTGCGCGAGGAGGACGGCAGCTTCAGCAAGCGCGTCCGCCACT TCAACTGGCGCATCATCTTCCGGCCGCGCACGCTGCTTTATACGGCCATCTGGACGGCCGTCGGCATCGGCCTATTGGTT GCTCTGGTGACGCGTGAGCGGCTGGCGCTTAATGTCCTGCACGACCGTAATCCGCAATATGTGCTGGAATCGAATGGTTC GATCCGCAACGGCTACACCGTCCGCATCCTCAACATGGTGCCGCAGCCGCGCATAATGAACCTGACGATAGAAGGCCTTC CGAATGCAGTGATGAAGATAAACGGCATGCCGGACACGGCTGCGCGCGCCTTCGAGGTGACGGTGGAGCCGGATGAGGCG ACGACGTTGAAGGTCTTCGTCACCCTGCCGGGCGAGGATGTCGCGCGGACGGCGGAAAATTTCGAATTCATCGTCAGCGA TACGGCCGGCCACGAAACGGCCCGTTACGATGCGGTCTTCAATGCTCCGGGAGTGAAAAAATGA
Upstream 100 bases:
>100_bases CTTTCCCCGGACTGCGCCACTTTGTCGTCACTTGATGTAAGTCAAGGATGTTTCACCGCGGAGGTGGGAGAAAGCAAGGA GATAAAAATGGACTCCTATC
Downstream 100 bases:
>100_bases CAGTGAACAATCAACGCGCTTCCGGGTTTGTTTTCACCGGCTGGCACATGCTCGGCGTGATGGTGCTGTTCTTCGGCACC GTCATTACCGTCAACATGAT
Product: nitrogen fixation protein FixG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MNIYRAGQDRPQQPVERLEAEAVNSAKTRKPLYEARKKIFPKRAEGRFRRFKWLVMLITLGIYYLTPFLRWDRGPYAPDQ AVLIDIANRRFYFFFIEIWPQEFFFVAGLLVMAGLGLFLVTSAVGRAWCGYTCPQTVWVDLFLVVERAIEGDRNARMKLD AAPFTFGKLRKRVLKHAIWLVIGVLTGGAWIFYFADAPTLAMQFMTGQAPMIAYSTVATLTATTYVFGGLMREQVCTYMC PWPRIQAAMLDENSLVVTYNDWRGEPRSRHAKKAAAAGESIGDCVDCNACVAVCPMGIDIRDGQQLECITCALCIDACDG VMDKIGKPRGLIAYATLSEYQSNMALATGNGEYAIRPANVREEDGSFSKRVRHFNWRIIFRPRTLLYTAIWTAVGIGLLV ALVTRERLALNVLHDRNPQYVLESNGSIRNGYTVRILNMVPQPRIMNLTIEGLPNAVMKINGMPDTAARAFEVTVEPDEA TTLKVFVTLPGEDVARTAENFEFIVSDTAGHETARYDAVFNAPGVKK
Sequences:
>Translated_527_residues MNIYRAGQDRPQQPVERLEAEAVNSAKTRKPLYEARKKIFPKRAEGRFRRFKWLVMLITLGIYYLTPFLRWDRGPYAPDQ AVLIDIANRRFYFFFIEIWPQEFFFVAGLLVMAGLGLFLVTSAVGRAWCGYTCPQTVWVDLFLVVERAIEGDRNARMKLD AAPFTFGKLRKRVLKHAIWLVIGVLTGGAWIFYFADAPTLAMQFMTGQAPMIAYSTVATLTATTYVFGGLMREQVCTYMC PWPRIQAAMLDENSLVVTYNDWRGEPRSRHAKKAAAAGESIGDCVDCNACVAVCPMGIDIRDGQQLECITCALCIDACDG VMDKIGKPRGLIAYATLSEYQSNMALATGNGEYAIRPANVREEDGSFSKRVRHFNWRIIFRPRTLLYTAIWTAVGIGLLV ALVTRERLALNVLHDRNPQYVLESNGSIRNGYTVRILNMVPQPRIMNLTIEGLPNAVMKINGMPDTAARAFEVTVEPDEA TTLKVFVTLPGEDVARTAENFEFIVSDTAGHETARYDAVFNAPGVKK >Mature_527_residues MNIYRAGQDRPQQPVERLEAEAVNSAKTRKPLYEARKKIFPKRAEGRFRRFKWLVMLITLGIYYLTPFLRWDRGPYAPDQ AVLIDIANRRFYFFFIEIWPQEFFFVAGLLVMAGLGLFLVTSAVGRAWCGYTCPQTVWVDLFLVVERAIEGDRNARMKLD AAPFTFGKLRKRVLKHAIWLVIGVLTGGAWIFYFADAPTLAMQFMTGQAPMIAYSTVATLTATTYVFGGLMREQVCTYMC PWPRIQAAMLDENSLVVTYNDWRGEPRSRHAKKAAAAGESIGDCVDCNACVAVCPMGIDIRDGQQLECITCALCIDACDG VMDKIGKPRGLIAYATLSEYQSNMALATGNGEYAIRPANVREEDGSFSKRVRHFNWRIIFRPRTLLYTAIWTAVGIGLLV ALVTRERLALNVLHDRNPQYVLESNGSIRNGYTVRILNMVPQPRIMNLTIEGLPNAVMKINGMPDTAARAFEVTVEPDEA TTLKVFVTLPGEDVARTAENFEFIVSDTAGHETARYDAVFNAPGVKK
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59174; Mature: 59174
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYRAGQDRPQQPVERLEAEAVNSAKTRKPLYEARKKIFPKRAEGRFRRFKWLVMLITL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GIYYLTPFLRWDRGPYAPDQAVLIDIANRRFYFFFIEIWPQEFFFVAGLLVMAGLGLFLV HHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH TSAVGRAWCGYTCPQTVWVDLFLVVERAIEGDRNARMKLDAAPFTFGKLRKRVLKHAIWL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH VIGVLTGGAWIFYFADAPTLAMQFMTGQAPMIAYSTVATLTATTYVFGGLMREQVCTYMC HHHHHHCCEEEEEEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC PWPRIQAAMLDENSLVVTYNDWRGEPRSRHAKKAAAAGESIGDCVDCNACVAVCPMGIDI CCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEE RDGQQLECITCALCIDACDGVMDKIGKPRGLIAYATLSEYQSNMALATGNGEYAIRPANV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCEEEEECCCCEEEECCCC REEDGSFSKRVRHFNWRIIFRPRTLLYTAIWTAVGIGLLVALVTRERLALNVLHDRNPQY CCCCCCHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCE VLESNGSIRNGYTVRILNMVPQPRIMNLTIEGLPNAVMKINGMPDTAARAFEVTVEPDEA EEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCC TTLKVFVTLPGEDVARTAENFEFIVSDTAGHETARYDAVFNAPGVKK EEEEEEEECCCHHHHHHHCCCEEEEECCCCCCCHHCCEEECCCCCCC >Mature Secondary Structure MNIYRAGQDRPQQPVERLEAEAVNSAKTRKPLYEARKKIFPKRAEGRFRRFKWLVMLITL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GIYYLTPFLRWDRGPYAPDQAVLIDIANRRFYFFFIEIWPQEFFFVAGLLVMAGLGLFLV HHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH TSAVGRAWCGYTCPQTVWVDLFLVVERAIEGDRNARMKLDAAPFTFGKLRKRVLKHAIWL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH VIGVLTGGAWIFYFADAPTLAMQFMTGQAPMIAYSTVATLTATTYVFGGLMREQVCTYMC HHHHHHCCEEEEEEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC PWPRIQAAMLDENSLVVTYNDWRGEPRSRHAKKAAAAGESIGDCVDCNACVAVCPMGIDI CCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEE RDGQQLECITCALCIDACDGVMDKIGKPRGLIAYATLSEYQSNMALATGNGEYAIRPANV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCEEEEECCCCEEEECCCC REEDGSFSKRVRHFNWRIIFRPRTLLYTAIWTAVGIGLLVALVTRERLALNVLHDRNPQY CCCCCCHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCE VLESNGSIRNGYTVRILNMVPQPRIMNLTIEGLPNAVMKINGMPDTAARAFEVTVEPDEA EEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCC TTLKVFVTLPGEDVARTAENFEFIVSDTAGHETARYDAVFNAPGVKK EEEEEEEECCCHHHHHHHCCCEEEEECCCCCCCHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]