Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fixH [H]
Identifier: 15888853
GI number: 15888853
Start: 1521639
End: 1522139
Strand: Reverse
Name: fixH [H]
Synonym: Atu1529
Alternate gene names: 15888853
Gene position: 1522139-1521639 (Counterclockwise)
Preceding gene: 15888854
Following gene: 15888852
Centisome position: 53.57
GC content: 60.08
Gene sequence:
>501_bases ATGACAGTGAACAATCAACGCGCTTCCGGGTTTGTTTTCACCGGCTGGCACATGCTCGGCGTGATGGTGCTGTTCTTCGG CACCGTCATTACCGTCAACATGATCATGGCCTGGAACGCGGTCCACAGCTGGAGCGGGCTTGTCGTGCCCAACACCTATG TGGCCAGCCAGCAGTTCAACGCCAAGGCGGAAGCCGCCAAGGCAAGGGCTGCAACCGGCATCAAGGGCCGGCTCGTGGTG GATGAAAAGACCGTGCGCTATGAGGTGTTTCATCCCGAAACCGGCCCCGTCGACACGGATACGGTGACGGCGCATTTCCG CCGGCCTGTTGGTGAGAGCCAGAATTTCGACATGGAGCTTACCCCGGTTTCGACGGGTGTCTTCACCGCTGCGCATGACA TGTTGCCCGGTCAGTGGATCGTCGAGGTCACCGCCGTCAAGGAAGGCAGGATCATCGTGCATGAGGGCACGCGGATCGCC GTCATCAGGGGACGCAAATGA
Upstream 100 bases:
>100_bases TCGCGCGGACGGCGGAAAATTTCGAATTCATCGTCAGCGATACGGCCGGCCACGAAACGGCCCGTTACGATGCGGTCTTC AATGCTCCGGGAGTGAAAAA
Downstream 100 bases:
>100_bases GCTGCTGCGCACCGGGAACGGAAGGTTCGCTGGAGCTCGGCGAACCGCTTAATCCGCCATCGTCGGAGGAGTTGCTGCTG GCGAGCCGCGATCTGGGGCA
Product: nitrogen fixation protein FixH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTVNNQRASGFVFTGWHMLGVMVLFFGTVITVNMIMAWNAVHSWSGLVVPNTYVASQQFNAKAEAAKARAATGIKGRLVV DEKTVRYEVFHPETGPVDTDTVTAHFRRPVGESQNFDMELTPVSTGVFTAAHDMLPGQWIVEVTAVKEGRIIVHEGTRIA VIRGRK
Sequences:
>Translated_166_residues MTVNNQRASGFVFTGWHMLGVMVLFFGTVITVNMIMAWNAVHSWSGLVVPNTYVASQQFNAKAEAAKARAATGIKGRLVV DEKTVRYEVFHPETGPVDTDTVTAHFRRPVGESQNFDMELTPVSTGVFTAAHDMLPGQWIVEVTAVKEGRIIVHEGTRIA VIRGRK >Mature_165_residues TVNNQRASGFVFTGWHMLGVMVLFFGTVITVNMIMAWNAVHSWSGLVVPNTYVASQQFNAKAEAAKARAATGIKGRLVVD EKTVRYEVFHPETGPVDTDTVTAHFRRPVGESQNFDMELTPVSTGVFTAAHDMLPGQWIVEVTAVKEGRIIVHEGTRIAV IRGRK
Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008620 - InterPro: IPR018037 [H]
Pfam domain/function: PF05751 FixH [H]
EC number: NA
Molecular weight: Translated: 18285; Mature: 18154
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVNNQRASGFVFTGWHMLGVMVLFFGTVITVNMIMAWNAVHSWSGLVVPNTYVASQQFN CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCCC AKAEAAKARAATGIKGRLVVDEKTVRYEVFHPETGPVDTDTVTAHFRRPVGESQNFDMEL CHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEE TPVSTGVFTAAHDMLPGQWIVEVTAVKEGRIIVHEGTRIAVIRGRK EECCCCEEEHHHHCCCCCEEEEEEEECCCEEEEECCCEEEEEECCC >Mature Secondary Structure TVNNQRASGFVFTGWHMLGVMVLFFGTVITVNMIMAWNAVHSWSGLVVPNTYVASQQFN CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCCC AKAEAAKARAATGIKGRLVVDEKTVRYEVFHPETGPVDTDTVTAHFRRPVGESQNFDMEL CHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEE TPVSTGVFTAAHDMLPGQWIVEVTAVKEGRIIVHEGTRIAVIRGRK EECCCCEEEHHHHCCCCCEEEEEEEECCCEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]