Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fixI [H]
Identifier: 15888852
GI number: 15888852
Start: 1519351
End: 1521642
Strand: Reverse
Name: fixI [H]
Synonym: Atu1528
Alternate gene names: 15888852
Gene position: 1521642-1519351 (Counterclockwise)
Preceding gene: 15888853
Following gene: 159184801
Centisome position: 53.55
GC content: 63.79
Gene sequence:
>2292_bases ATGAGCTGCTGCGCACCGGGAACGGAAGGTTCGCTGGAGCTCGGCGAACCGCTTAATCCGCCATCGTCGGAGGAGTTGCT GCTGGCGAGCCGCGATCTGGGGCAGGGGTTGCGCCAGACCGATCTTAGCGTGCCCGGTGTTTATTGCGGCGCCTGCATCA CCACCATCGAGACCGCGCTCGGCCGTCTCGGCCAAGTGGAGCGGGCGCGGGTGAACCTGTCTTCGAAACGTGTGGCGGTT GTCTGGAAAGAAGAGGTCAATGGCGTCAGGACCGATCCCGCCGACATTGCCCGCGCCATCCTTGCGACGGGATATCGCAT ACATCTTTTCGCCAGCGGGCAGGATGCTTCATACGCCTTGCGCTCGCAGCTGATCAGGGCGGTGGCGCTGTGCGGCTTTG CTTCCGCCAATATCATGCTTCTGTCGGTCTCCGTCTGGTCGGGGGCGGATGCCGCGACGCGTGACATGTTCCACTGGATA TCGGCGATGATCGCCGCGCCGGCGCTGATCTATGGCGGGCGTTTCTTTTACCAGTCGGCCTGGAACGCGCTGAAACACGG CCGCACCAACATGGATGTGCCGATTGCGCTCGCCATCACGCTCTCCTATGCCGTTTCGCTGTGGGAGACCATTCATCACG GCGAACATGCGTGGTTCGATGCGACCGTGTCGCTGCTGTTCTTCCTGCTGATCGGCCGCACGCTGGACCATATCATGCGC GACAAGGCGCGCTCCGCCATTGCCGGATTGGCCCGGCTTTCGCCGCGAGGGGCAACGGTGATCGATGCAGACGGGGTCCG GGACTACCGGCCGCTTGCGGATATCGAACCTGGAATGTCGATTGCGATTGCGGCGGGTGACCGGGTGGCGGTGGATGCCG TGGTGGTCTGCGGCAGCAGCGATCTCGACATGTCCATCGTCAATGGTGAAAGCGCGCCGCGCCGCGTCGTGGCCGGCGAC AGCCTGCAGGCCGGCACGCTCAATCTCACCGGGTCGCTTGTCGCCCGGGTAACCGCGTCCGCAAAGGATTCTTTCCTGTC GGAAGTGATCGGGTTGATGGAGGCGGCCGAAGGCGGGCGCGCGCGTTACCGGCGTATCGCCGACCGTGCCGCGAGCTATT ATTCGCCCGTGGTGCATCTTCTGGCGCTGGTGACGTTTCTCGGCTGGGGCATTTTCGGCGGTGACTGGAAACAGGCGATG CTGATCGCCATTGCTGTTCTCATCATAACCTGCCCCTGCGCGCTCGGCCTTGCTGTTCCAGTCGTGCAGGTGGTGGCCGC AGGAAGGCTTTTTCGGCGTGGCATCATGGTCAAGGAAGGCTCGGCCATGGAGCGTCTTTCGGAGATCGATACCGTGCTGT TCGACAAGACCGGGACCTTGACCGTCGGCAAGCCTAGGCTGGTCGAGACCGCAGATGTGAAGCCGGCCATCATGGCGATT GCGGCGGGGCTCGCTGCCCATTCGCGCCATCCTCTCTCGAAAGCCCTGCATGCCGCCTATAATGGTGCCTTGCCAGCCTA TGAGGCGGTGCGGGAAATTCCGGGGTCGGGTGTCGAGGCCGAGACGGAAGCCGGCACTTACCGGCTCGGCAATCGCCGTT TCGCCTGCCCGGATGAGACACGGATCAACAATGGCGATGCGCGGTCGGAAGTGGTGCTGTCTCTCGACGGCCGGCATCTG GCGAGCTTCGGCTTCGAGGACAATCCGCGCGCGGGTGCTATTGCGGCATTGCGCAGCCTGTCTGTGCGGGGCCTTGCGCA GGAAATCGTCTCGGGTGACCGGGCCGCCGCCGTCAGTGCGATGGCGCAGCGGCTGGGGATCGGCAACTGGCGCGCGGACC TGTCGCCGAAGGACAAGGCGGCGCGCTGTGCCGCGCTTGCCGGCGAGGGGCACAGGGTGCTGATGGTCGGGGATGGTATC AACGACGCGCCAGCGCTTGCCGCCGCCCACGTATCTATGGCGCCCGCCACCGCCGCCGATATTGGCCGGCAGGCCGCCGA TTTCGTGTTTATGCAGGAAGATCTCGATGCCGTACCTTTCGCGATCGAGACGTCGCAGCGAGCCGGCAACCTCATCCGGC AGAACTTTGCGCTTGCCATCGGCTACAATATCATCGCCGTACCGATTGCGATTGCCGGTTATGCGACGCCGATGATTGCG GCCATTGCCATGTCGACATCTTCGCTGATCGTCGTTGCCAATGCGCTGCGCCTTGCCGGTGCTGCTGACACTATTCTCCC TCAGAAGGAAGCGAAGTCGGGATTTACGGGCGAGGGGGCGCAACTGGCATGA
Upstream 100 bases:
>100_bases ACATGTTGCCCGGTCAGTGGATCGTCGAGGTCACCGCCGTCAAGGAAGGCAGGATCATCGTGCATGAGGGCACGCGGATC GCCGTCATCAGGGGACGCAA
Downstream 100 bases:
>100_bases ACATGCTGATCTATCTCATTCCCGTCGCGCTGTTCCTGGGCGCGCTCGGGCTTTTCGCCTTCCTCTGGTCGGTGCGCTCA GGTCAATATGAGGATATGGA
Product: nitrogen fixation protein FixI
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MSCCAPGTEGSLELGEPLNPPSSEELLLASRDLGQGLRQTDLSVPGVYCGACITTIETALGRLGQVERARVNLSSKRVAV VWKEEVNGVRTDPADIARAILATGYRIHLFASGQDASYALRSQLIRAVALCGFASANIMLLSVSVWSGADAATRDMFHWI SAMIAAPALIYGGRFFYQSAWNALKHGRTNMDVPIALAITLSYAVSLWETIHHGEHAWFDATVSLLFFLLIGRTLDHIMR DKARSAIAGLARLSPRGATVIDADGVRDYRPLADIEPGMSIAIAAGDRVAVDAVVVCGSSDLDMSIVNGESAPRRVVAGD SLQAGTLNLTGSLVARVTASAKDSFLSEVIGLMEAAEGGRARYRRIADRAASYYSPVVHLLALVTFLGWGIFGGDWKQAM LIAIAVLIITCPCALGLAVPVVQVVAAGRLFRRGIMVKEGSAMERLSEIDTVLFDKTGTLTVGKPRLVETADVKPAIMAI AAGLAAHSRHPLSKALHAAYNGALPAYEAVREIPGSGVEAETEAGTYRLGNRRFACPDETRINNGDARSEVVLSLDGRHL ASFGFEDNPRAGAIAALRSLSVRGLAQEIVSGDRAAAVSAMAQRLGIGNWRADLSPKDKAARCAALAGEGHRVLMVGDGI NDAPALAAAHVSMAPATAADIGRQAADFVFMQEDLDAVPFAIETSQRAGNLIRQNFALAIGYNIIAVPIAIAGYATPMIA AIAMSTSSLIVVANALRLAGAADTILPQKEAKSGFTGEGAQLA
Sequences:
>Translated_763_residues MSCCAPGTEGSLELGEPLNPPSSEELLLASRDLGQGLRQTDLSVPGVYCGACITTIETALGRLGQVERARVNLSSKRVAV VWKEEVNGVRTDPADIARAILATGYRIHLFASGQDASYALRSQLIRAVALCGFASANIMLLSVSVWSGADAATRDMFHWI SAMIAAPALIYGGRFFYQSAWNALKHGRTNMDVPIALAITLSYAVSLWETIHHGEHAWFDATVSLLFFLLIGRTLDHIMR DKARSAIAGLARLSPRGATVIDADGVRDYRPLADIEPGMSIAIAAGDRVAVDAVVVCGSSDLDMSIVNGESAPRRVVAGD SLQAGTLNLTGSLVARVTASAKDSFLSEVIGLMEAAEGGRARYRRIADRAASYYSPVVHLLALVTFLGWGIFGGDWKQAM LIAIAVLIITCPCALGLAVPVVQVVAAGRLFRRGIMVKEGSAMERLSEIDTVLFDKTGTLTVGKPRLVETADVKPAIMAI AAGLAAHSRHPLSKALHAAYNGALPAYEAVREIPGSGVEAETEAGTYRLGNRRFACPDETRINNGDARSEVVLSLDGRHL ASFGFEDNPRAGAIAALRSLSVRGLAQEIVSGDRAAAVSAMAQRLGIGNWRADLSPKDKAARCAALAGEGHRVLMVGDGI NDAPALAAAHVSMAPATAADIGRQAADFVFMQEDLDAVPFAIETSQRAGNLIRQNFALAIGYNIIAVPIAIAGYATPMIA AIAMSTSSLIVVANALRLAGAADTILPQKEAKSGFTGEGAQLA >Mature_762_residues SCCAPGTEGSLELGEPLNPPSSEELLLASRDLGQGLRQTDLSVPGVYCGACITTIETALGRLGQVERARVNLSSKRVAVV WKEEVNGVRTDPADIARAILATGYRIHLFASGQDASYALRSQLIRAVALCGFASANIMLLSVSVWSGADAATRDMFHWIS AMIAAPALIYGGRFFYQSAWNALKHGRTNMDVPIALAITLSYAVSLWETIHHGEHAWFDATVSLLFFLLIGRTLDHIMRD KARSAIAGLARLSPRGATVIDADGVRDYRPLADIEPGMSIAIAAGDRVAVDAVVVCGSSDLDMSIVNGESAPRRVVAGDS LQAGTLNLTGSLVARVTASAKDSFLSEVIGLMEAAEGGRARYRRIADRAASYYSPVVHLLALVTFLGWGIFGGDWKQAML IAIAVLIITCPCALGLAVPVVQVVAAGRLFRRGIMVKEGSAMERLSEIDTVLFDKTGTLTVGKPRLVETADVKPAIMAIA AGLAAHSRHPLSKALHAAYNGALPAYEAVREIPGSGVEAETEAGTYRLGNRRFACPDETRINNGDARSEVVLSLDGRHLA SFGFEDNPRAGAIAALRSLSVRGLAQEIVSGDRAAAVSAMAQRLGIGNWRADLSPKDKAARCAALAGEGHRVLMVGDGIN DAPALAAAHVSMAPATAADIGRQAADFVFMQEDLDAVPFAIETSQRAGNLIRQNFALAIGYNIIAVPIAIAGYATPMIAA IAMSTSSLIVVANALRLAGAADTILPQKEAKSGFTGEGAQLA
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI115529486, Length=833, Percent_Identity=26.7707082833133, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI55743071, Length=788, Percent_Identity=27.0304568527919, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI55743073, Length=551, Percent_Identity=27.4047186932849, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI48762691, Length=262, Percent_Identity=24.8091603053435, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI48762687, Length=262, Percent_Identity=24.8091603053435, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI48762689, Length=262, Percent_Identity=24.8091603053435, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI48762685, Length=262, Percent_Identity=24.8091603053435, Blast_Score=72, Evalue=3e-12, Organism=Escherichia coli, GI1786691, Length=738, Percent_Identity=32.520325203252, Blast_Score=308, Evalue=6e-85, Organism=Escherichia coli, GI1789879, Length=714, Percent_Identity=27.3109243697479, Blast_Score=207, Evalue=3e-54, Organism=Escherichia coli, GI1786914, Length=458, Percent_Identity=25.9825327510917, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17556548, Length=659, Percent_Identity=30.6525037936267, Blast_Score=247, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6320475, Length=625, Percent_Identity=27.84, Blast_Score=221, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6319772, Length=580, Percent_Identity=27.9310344827586, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6325221, Length=562, Percent_Identity=23.3096085409253, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321430, Length=554, Percent_Identity=22.2021660649819, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI221329854, Length=553, Percent_Identity=28.9330922242315, Blast_Score=186, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000695 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 80255; Mature: 80124
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCCAPGTEGSLELGEPLNPPSSEELLLASRDLGQGLRQTDLSVPGVYCGACITTIETAL CCCCCCCCCCCCCCCCCCCCCCCCHHEEECHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH GRLGQVERARVNLSSKRVAVVWKEEVNGVRTDPADIARAILATGYRIHLFASGQDASYAL HHHCCHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHH RSQLIRAVALCGFASANIMLLSVSVWSGADAATRDMFHWISAMIAAPALIYGGRFFYQSA HHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH WNALKHGRTNMDVPIALAITLSYAVSLWETIHHGEHAWFDATVSLLFFLLIGRTLDHIMR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH DKARSAIAGLARLSPRGATVIDADGVRDYRPLADIEPGMSIAIAAGDRVAVDAVVVCGSS HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCC DLDMSIVNGESAPRRVVAGDSLQAGTLNLTGSLVARVTASAKDSFLSEVIGLMEAAEGGR CCCEEEECCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ARYRRIADRAASYYSPVVHLLALVTFLGWGIFGGDWKQAMLIAIAVLIITCPCALGLAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVQVVAAGRLFRRGIMVKEGSAMERLSEIDTVLFDKTGTLTVGKPRLVETADVKPAIMAI HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCCHHHHHH AAGLAAHSRHPLSKALHAAYNGALPAYEAVREIPGSGVEAETEAGTYRLGNRRFACPDET HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCEECCCCCC RINNGDARSEVVLSLDGRHLASFGFEDNPRAGAIAALRSLSVRGLAQEIVSGDRAAAVSA CCCCCCCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MAQRLGIGNWRADLSPKDKAARCAALAGEGHRVLMVGDGINDAPALAAAHVSMAPATAAD HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHH IGRQAADFVFMQEDLDAVPFAIETSQRAGNLIRQNFALAIGYNIIAVPIAIAGYATPMIA HHHHHHHHEEECCCCCCCCEEEECCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHH AIAMSTSSLIVVANALRLAGAADTILPQKEAKSGFTGEGAQLA HHHHCCCCHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCC >Mature Secondary Structure SCCAPGTEGSLELGEPLNPPSSEELLLASRDLGQGLRQTDLSVPGVYCGACITTIETAL CCCCCCCCCCCCCCCCCCCCCCCHHEEECHHHHCCHHHCCCCCCCHHHHHHHHHHHHHH GRLGQVERARVNLSSKRVAVVWKEEVNGVRTDPADIARAILATGYRIHLFASGQDASYAL HHHCCHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHH RSQLIRAVALCGFASANIMLLSVSVWSGADAATRDMFHWISAMIAAPALIYGGRFFYQSA HHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH WNALKHGRTNMDVPIALAITLSYAVSLWETIHHGEHAWFDATVSLLFFLLIGRTLDHIMR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH DKARSAIAGLARLSPRGATVIDADGVRDYRPLADIEPGMSIAIAAGDRVAVDAVVVCGSS HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCC DLDMSIVNGESAPRRVVAGDSLQAGTLNLTGSLVARVTASAKDSFLSEVIGLMEAAEGGR CCCEEEECCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ARYRRIADRAASYYSPVVHLLALVTFLGWGIFGGDWKQAMLIAIAVLIITCPCALGLAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVQVVAAGRLFRRGIMVKEGSAMERLSEIDTVLFDKTGTLTVGKPRLVETADVKPAIMAI HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCCHHHHHH AAGLAAHSRHPLSKALHAAYNGALPAYEAVREIPGSGVEAETEAGTYRLGNRRFACPDET HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCEECCCCCC RINNGDARSEVVLSLDGRHLASFGFEDNPRAGAIAALRSLSVRGLAQEIVSGDRAAAVSA CCCCCCCCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MAQRLGIGNWRADLSPKDKAARCAALAGEGHRVLMVGDGINDAPALAAAHVSMAPATAAD HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHH IGRQAADFVFMQEDLDAVPFAIETSQRAGNLIRQNFALAIGYNIIAVPIAIAGYATPMIA HHHHHHHHEEECCCCCCCCEEEECCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHH AIAMSTSSLIVVANALRLAGAADTILPQKEAKSGFTGEGAQLA HHHHCCCCHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]