Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is zur [H]
Identifier: 15888843
GI number: 15888843
Start: 1508616
End: 1509029
Strand: Reverse
Name: zur [H]
Synonym: Atu1518
Alternate gene names: 15888843
Gene position: 1509029-1508616 (Counterclockwise)
Preceding gene: 159184796
Following gene: 15888840
Centisome position: 53.11
GC content: 58.94
Gene sequence:
>414_bases ATGAATGCGCAGACCCAGCAGAACCTCACCAAGAACCAGTCGCTGGTGATGAATGCCCTCTCAAACGCGCATCAGCCGCT CAGCGCCTATATGATCCTCGACAAGCTGCGCGACGATGGCTTCCGCGCGCCGTTACAGGTTTACCGGGCGCTGGAAAAGC TGGTGGAATTCGGTCTCGTGCACCGGCTGGAAAGCCTCAACGCCTTTGTTGCCTGCACACATACGCAGGCCGAATGCTGC TCGCAACACCATGGAAGCGTGGCTTTTGCCATCTGCGAATCCTGCGGGCAGGTGACGGAGTTTCACGACCATGAGATCGA CCACCGTCTGGAGCGCTGGGTGAATGACAGCAAGTTCAAGGCGGAAAAGACCACCATCGAAATCCGCGGCCTCTGCGCCG CCTGCGCGGCATAA
Upstream 100 bases:
>100_bases CGTCCGGCCCATCCATCGTGGTTGCCGCGGTGATCCTGTTCGTTATAAGCCTGTTGCCGGCGCCGGGTTTTTCCCGCTCC GCGGATGAAGGAGGCAAGCC
Downstream 100 bases:
>100_bases CGCCAATTGTGAGGGGCGGGAGTCAGCGCCCGCCATCTATCATTATTCGATGATCGCCAGATCCGTCGAAAAACGTTTCC AGTTCTCGATGTATTTTTCC
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNAQTQQNLTKNQSLVMNALSNAHQPLSAYMILDKLRDDGFRAPLQVYRALEKLVEFGLVHRLESLNAFVACTHTQAECC SQHHGSVAFAICESCGQVTEFHDHEIDHRLERWVNDSKFKAEKTTIEIRGLCAACAA
Sequences:
>Translated_137_residues MNAQTQQNLTKNQSLVMNALSNAHQPLSAYMILDKLRDDGFRAPLQVYRALEKLVEFGLVHRLESLNAFVACTHTQAECC SQHHGSVAFAICESCGQVTEFHDHEIDHRLERWVNDSKFKAEKTTIEIRGLCAACAA >Mature_137_residues MNAQTQQNLTKNQSLVMNALSNAHQPLSAYMILDKLRDDGFRAPLQVYRALEKLVEFGLVHRLESLNAFVACTHTQAECC SQHHGSVAFAICESCGQVTEFHDHEIDHRLERWVNDSKFKAEKTTIEIRGLCAACAA
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=140, Percent_Identity=35, Blast_Score=66, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15387; Mature: 15387
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQTQQNLTKNQSLVMNALSNAHQPLSAYMILDKLRDDGFRAPLQVYRALEKLVEFGLV CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH HRLESLNAFVACTHTQAECCSQHHGSVAFAICESCGQVTEFHDHEIDHRLERWVNDSKFK HHHHHHHHHHEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AEKTTIEIRGLCAACAA HHHHHHHHHHHHHHHCC >Mature Secondary Structure MNAQTQQNLTKNQSLVMNALSNAHQPLSAYMILDKLRDDGFRAPLQVYRALEKLVEFGLV CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH HRLESLNAFVACTHTQAECCSQHHGSVAFAICESCGQVTEFHDHEIDHRLERWVNDSKFK HHHHHHHHHHEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AEKTTIEIRGLCAACAA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]