Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888836
Identifier: 15888836
GI number: 15888836
Start: 1501206
End: 1501472
Strand: Reverse
Name: 15888836
Synonym: Atu1511
Alternate gene names: NA
Gene position: 1501472-1501206 (Counterclockwise)
Preceding gene: 159184791
Following gene: 159184790
Centisome position: 52.84
GC content: 57.68
Gene sequence:
>267_bases ATGGCGAACATGACCTTTTCCTTGCCAGACCCGATGAAAGACTGGATCGAAAGCCGTATCCAGAAGGGCGAATACGCCAG CGCCAGTGACTATGTGCGGGATCTCGTACGACGTGACTGGGCCCGGCGAGGGCAGGATTTCAGCATTGACGAGCTTCGCC AAATCGTTGCGGAGTCCCGCGCCAGTGGTGTCGGGTCCCGCAGCATGGATGATTTGTTCGCGGAAGCTGAACGTGTAGCG ACAGCCCACGGTGTCATGCGTGAATAA
Upstream 100 bases:
>100_bases TCCGTTCTGAGGCTGATACTGTCGACACTGCCGCAAGTCAGAATTTTGTGGTTTTTTCGATGTATTGATATCATCATCGG GCTGACAGGAGATTTGAGAC
Downstream 100 bases:
>100_bases TTATCGGTTGAGCACGCAAGCCGAAAACGAAATTCTCGACATCTTCCTCTATGGTATTGAACGGTTCGGATTGAATCAGG CACGTCTGTACAAAGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module Antidote Protein Family; Helix-Turn-Helix Protein CopG; CopG/Arc/MetJ Family Transcriptional Regulator; Addiction Module Antidote Protein; Antitoxin
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MANMTFSLPDPMKDWIESRIQKGEYASASDYVRDLVRRDWARRGQDFSIDELRQIVAESRASGVGSRSMDDLFAEAERVA TAHGVMRE
Sequences:
>Translated_88_residues MANMTFSLPDPMKDWIESRIQKGEYASASDYVRDLVRRDWARRGQDFSIDELRQIVAESRASGVGSRSMDDLFAEAERVA TAHGVMRE >Mature_87_residues ANMTFSLPDPMKDWIESRIQKGEYASASDYVRDLVRRDWARRGQDFSIDELRQIVAESRASGVGSRSMDDLFAEAERVAT AHGVMRE
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10040; Mature: 9909
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANMTFSLPDPMKDWIESRIQKGEYASASDYVRDLVRRDWARRGQDFSIDELRQIVAESR CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ASGVGSRSMDDLFAEAERVATAHGVMRE HCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANMTFSLPDPMKDWIESRIQKGEYASASDYVRDLVRRDWARRGQDFSIDELRQIVAESR CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ASGVGSRSMDDLFAEAERVATAHGVMRE HCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA