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The map label for this gene is prtR

Identifier: 15888809

GI number: 15888809

Start: 1475195

End: 1475971

Strand: Reverse

Name: prtR

Synonym: Atu1484

Alternate gene names: NA

Gene position: 1475971-1475195 (Counterclockwise)

Preceding gene: 159184775

Following gene: 15888808

Centisome position: 51.94

GC content: 59.46

Gene sequence:

>777_bases
ATGACCGGCAACGAGCCACAGATAACCGAAGCCGATCTGCTCTCTTATGTCGACGGGCAGCTTGAAGACGACAGGCTCAA
TGCCGTTCGTGCCCACCTCACCTCCAATCCGGCCGACGCCCGCAAGGTCAAGATGTGGCAGCAGCAAAATGCGACGCTGA
CTGCTCTTTATCGCCCTCTCGACACCAATGTTGTACCCGATCGCCTCGATGTATTCCGCATTGAGCGACGCATGCGATCG
GAACGGGCTGACTGGCGCAATAGGGCGGCAGCAGCCGTCATTGTTTTTGCCATCGGGCTGACAGGCGGCTGGTTAGGACG
CAGGCTTGTATCCGATGTTGCCGAACCTGCTTCCATCGTGGCGGATGCAGCGCAGGCACATAAGCTTTTTGCGAGCGACG
TTCTGCATCCGGTGGAGGTCCGCGCCGATAGCGAAGATGCTCAAAACCTGCCGAAATGGCTCTCCAAGCGGTTGGACCGT
AAAATCAACATCCCGGATCTCACCCGTCACGGCCTCTCCCTCGTTGGTGGTCGTGTGCTGCCCGGTTCCGAAGGCCCTGC
CGCCCAGCTTATGTACGAAGATAAGGGCGGGCAGCGTATCACGCTTTACATCGTTGCCGCGGTGGACTCGAGCGACAGCG
CCATGCGGCGCTCCAGCGTCGGTTCGCTGGAAACGGTGTCATGGGACGACGAAATGATCCGATGCGCCCTCGTCGGCAAC
CTGCCGACGGACCGCATGGACGCCATCGCCAAAGACACCTATCAACAGCTGAGTTAA

Upstream 100 bases:

>100_bases
TTGAAATTCCCCTTGGCACACTGATGTCCCGTCTGGGACGAGCCCGAACGGCGCTTGCCCGCATGACCCAGGAAGACCAG
CCAAATCTCAAGGTGATAAA

Downstream 100 bases:

>100_bases
CCGATGCAAGATTTTGGCGATAATTCAGGGAGAGCCCCGGCTGCTGGACGCAGCTGGCGCAACACGCCCTCATCCTTTGG
GGTAGTGGCGATCGCATTCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator; Transmembrane Regulator PrtR; Anti-Sigma Factor; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Transmembrane Activator Of PrtI; Sigma Factor Regulator PrtR; Transmembrane Transcription Regulator; Transmembrane Regulatory Protein

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTGNEPQITEADLLSYVDGQLEDDRLNAVRAHLTSNPADARKVKMWQQQNATLTALYRPLDTNVVPDRLDVFRIERRMRS
ERADWRNRAAAAVIVFAIGLTGGWLGRRLVSDVAEPASIVADAAQAHKLFASDVLHPVEVRADSEDAQNLPKWLSKRLDR
KINIPDLTRHGLSLVGGRVLPGSEGPAAQLMYEDKGGQRITLYIVAAVDSSDSAMRRSSVGSLETVSWDDEMIRCALVGN
LPTDRMDAIAKDTYQQLS

Sequences:

>Translated_258_residues
MTGNEPQITEADLLSYVDGQLEDDRLNAVRAHLTSNPADARKVKMWQQQNATLTALYRPLDTNVVPDRLDVFRIERRMRS
ERADWRNRAAAAVIVFAIGLTGGWLGRRLVSDVAEPASIVADAAQAHKLFASDVLHPVEVRADSEDAQNLPKWLSKRLDR
KINIPDLTRHGLSLVGGRVLPGSEGPAAQLMYEDKGGQRITLYIVAAVDSSDSAMRRSSVGSLETVSWDDEMIRCALVGN
LPTDRMDAIAKDTYQQLS
>Mature_257_residues
TGNEPQITEADLLSYVDGQLEDDRLNAVRAHLTSNPADARKVKMWQQQNATLTALYRPLDTNVVPDRLDVFRIERRMRSE
RADWRNRAAAAVIVFAIGLTGGWLGRRLVSDVAEPASIVADAAQAHKLFASDVLHPVEVRADSEDAQNLPKWLSKRLDRK
INIPDLTRHGLSLVGGRVLPGSEGPAAQLMYEDKGGQRITLYIVAAVDSSDSAMRRSSVGSLETVSWDDEMIRCALVGNL
PTDRMDAIAKDTYQQLS

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28518; Mature: 28386

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNEPQITEADLLSYVDGQLEDDRLNAVRAHLTSNPADARKVKMWQQQNATLTALYRPL
CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCC
DTNVVPDRLDVFRIERRMRSERADWRNRAAAAVIVFAIGLTGGWLGRRLVSDVAEPASIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ADAAQAHKLFASDVLHPVEVRADSEDAQNLPKWLSKRLDRKINIPDLTRHGLSLVGGRVL
HHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
PGSEGPAAQLMYEDKGGQRITLYIVAAVDSSDSAMRRSSVGSLETVSWDDEMIRCALVGN
CCCCCCCEEEEEECCCCCEEEEEEEEEECCCCHHHHHHCCCCCEEECCHHHHEEEEEECC
LPTDRMDAIAKDTYQQLS
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGNEPQITEADLLSYVDGQLEDDRLNAVRAHLTSNPADARKVKMWQQQNATLTALYRPL
CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCC
DTNVVPDRLDVFRIERRMRSERADWRNRAAAAVIVFAIGLTGGWLGRRLVSDVAEPASIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ADAAQAHKLFASDVLHPVEVRADSEDAQNLPKWLSKRLDRKINIPDLTRHGLSLVGGRVL
HHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
PGSEGPAAQLMYEDKGGQRITLYIVAAVDSSDSAMRRSSVGSLETVSWDDEMIRCALVGN
CCCCCCCEEEEEECCCCCEEEEEEEEEECCCCHHHHHHCCCCCEEECCHHHHEEEEEECC
LPTDRMDAIAKDTYQQLS
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA