Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888792

Identifier: 15888792

GI number: 15888792

Start: 1463522

End: 1464496

Strand: Direct

Name: 15888792

Synonym: Atu1468

Alternate gene names: NA

Gene position: 1463522-1464496 (Clockwise)

Preceding gene: 159184770

Following gene: 15888794

Centisome position: 51.5

GC content: 60.82

Gene sequence:

>975_bases
ATGAAAACCACCAAGATCATCACCTGCACTCTCTTCGTAGCATCGGTTTCGACCGCGCCGGCTTTTGCGCACGCCACATT
CGTGGACGGCTCGGCCGAACAGGACAGCACCATCGTTGCCGCCCTCCAGGTGCCGCATGGCTGCGATGGCGGGCTTGCCA
CCACGGAAGTGCAGATCAAGCTGCCGGAAGGCTTCATTTCCGCCAAGCCGCAGCCCAAGGCCGGCTGGGAGCTGGAAATC
ATCAAGGGCGAGTACCAGAAGACCTACAAGAACCACGGCAAGGACATCGCGAGTGGGGCTGTCGAGGTCCGCTGGAAGGG
TGGCGACCTGCCGGACGAGTTCTATGACACCTTCGCCGTGCAGGGCAAAATCTCCGGCGTCGAAGTCGGGCAGGATCTGC
CTTTCAAGGTGACGCAGCTCTGCGGCGACAAGGGCAAGGTCTCCTGGGATGAGGTCGCAGCCGCTGGCGTCGATCCGCAT
TCGCTGAAAAGCCCGGCGCCGACCATCAAGGTCGCTGCCAAGGCGCATCCGGGCGGGCATGATCATTCCGGCATGAGCAT
GGATATGGATGTCGTGAAGGTCGGCAACCTCGAAGTGTCTGATGGCGCGACCAAGGCCATGCTGCCGGGTCAACCGGTTG
GTGGCGGTTACGTGACCATCAAGAACACCGGCGACAGCGACGACAAGCTGGTCGGTATCGAATCCTCAGCCGCCGGCCGC
GCTGAAATCCACGAGATGGCCATGGTCAACGACGTCATGAAAATGCGCAAGCTGGATGAGGGTATCGTCATTCCCGCCGG
CCAAACGGTGGAACTGAAGCCCGGCGGCCTGCACATGATGTTCTTCAATGTGAAGAAACCCTTTGCCGAAGGCGACAAGG
TGCCGGTGACGTTGGTCTTTGAGAAGGCCGGCAAGGTAGAGATCGTGCTCTCCGCGGGCGCAGCCAAGGGCGGCACCGAT
CATCAGCATAATTGA

Upstream 100 bases:

>100_bases
CCCTGTCCTCCTGATTTTTCACATTACGGGATCATCGCCGCCTATCGGTGGCACGGAGCGGCTGCGGAGCCCCAGGGGGC
GCAGTCGCAGGGACAGACAA

Downstream 100 bases:

>100_bases
CGGAAGAAAAACGGCTACCGGAACGCGTGACAGGTCCGGTAGCCGCAAGATGTCTCACACATTGTATTTGTTTTTCAGCG
CCGTGATGGAAAAGGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKTTKIITCTLFVASVSTAPAFAHATFVDGSAEQDSTIVAALQVPHGCDGGLATTEVQIKLPEGFISAKPQPKAGWELEI
IKGEYQKTYKNHGKDIASGAVEVRWKGGDLPDEFYDTFAVQGKISGVEVGQDLPFKVTQLCGDKGKVSWDEVAAAGVDPH
SLKSPAPTIKVAAKAHPGGHDHSGMSMDMDVVKVGNLEVSDGATKAMLPGQPVGGGYVTIKNTGDSDDKLVGIESSAAGR
AEIHEMAMVNDVMKMRKLDEGIVIPAGQTVELKPGGLHMMFFNVKKPFAEGDKVPVTLVFEKAGKVEIVLSAGAAKGGTD
HQHN

Sequences:

>Translated_324_residues
MKTTKIITCTLFVASVSTAPAFAHATFVDGSAEQDSTIVAALQVPHGCDGGLATTEVQIKLPEGFISAKPQPKAGWELEI
IKGEYQKTYKNHGKDIASGAVEVRWKGGDLPDEFYDTFAVQGKISGVEVGQDLPFKVTQLCGDKGKVSWDEVAAAGVDPH
SLKSPAPTIKVAAKAHPGGHDHSGMSMDMDVVKVGNLEVSDGATKAMLPGQPVGGGYVTIKNTGDSDDKLVGIESSAAGR
AEIHEMAMVNDVMKMRKLDEGIVIPAGQTVELKPGGLHMMFFNVKKPFAEGDKVPVTLVFEKAGKVEIVLSAGAAKGGTD
HQHN
>Mature_324_residues
MKTTKIITCTLFVASVSTAPAFAHATFVDGSAEQDSTIVAALQVPHGCDGGLATTEVQIKLPEGFISAKPQPKAGWELEI
IKGEYQKTYKNHGKDIASGAVEVRWKGGDLPDEFYDTFAVQGKISGVEVGQDLPFKVTQLCGDKGKVSWDEVAAAGVDPH
SLKSPAPTIKVAAKAHPGGHDHSGMSMDMDVVKVGNLEVSDGATKAMLPGQPVGGGYVTIKNTGDSDDKLVGIESSAAGR
AEIHEMAMVNDVMKMRKLDEGIVIPAGQTVELKPGGLHMMFFNVKKPFAEGDKVPVTLVFEKAGKVEIVLSAGAAKGGTD
HQHN

Specific function: Unknown

COG id: COG4549

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007410 [H]

Pfam domain/function: PF04314 DUF461 [H]

EC number: NA

Molecular weight: Translated: 34074; Mature: 34074

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTKIITCTLFVASVSTAPAFAHATFVDGSAEQDSTIVAALQVPHGCDGGLATTEVQIK
CCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEE
LPEGFISAKPQPKAGWELEIIKGEYQKTYKNHGKDIASGAVEVRWKGGDLPDEFYDTFAV
CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHCCEEEEEECCCCCCHHHHHHEEE
QGKISGVEVGQDLPFKVTQLCGDKGKVSWDEVAAAGVDPHSLKSPAPTIKVAAKAHPGGH
EEEECEEECCCCCCHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCEEEEEEECCCCCC
DHSGMSMDMDVVKVGNLEVSDGATKAMLPGQPVGGGYVTIKNTGDSDDKLVGIESSAAGR
CCCCCEECEEEEEECCEEECCCCCEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCH
AEIHEMAMVNDVMKMRKLDEGIVIPAGQTVELKPGGLHMMFFNVKKPFAEGDKVPVTLVF
HHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEE
EKAGKVEIVLSAGAAKGGTDHQHN
ECCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKTTKIITCTLFVASVSTAPAFAHATFVDGSAEQDSTIVAALQVPHGCDGGLATTEVQIK
CCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEE
LPEGFISAKPQPKAGWELEIIKGEYQKTYKNHGKDIASGAVEVRWKGGDLPDEFYDTFAV
CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHCCEEEEEECCCCCCHHHHHHEEE
QGKISGVEVGQDLPFKVTQLCGDKGKVSWDEVAAAGVDPHSLKSPAPTIKVAAKAHPGGH
EEEECEEECCCCCCHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCEEEEEEECCCCCC
DHSGMSMDMDVVKVGNLEVSDGATKAMLPGQPVGGGYVTIKNTGDSDDKLVGIESSAAGR
CCCCCEECEEEEEECCEEECCCCCEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCH
AEIHEMAMVNDVMKMRKLDEGIVIPAGQTVELKPGGLHMMFFNVKKPFAEGDKVPVTLVF
HHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEE
EKAGKVEIVLSAGAAKGGTDHQHN
ECCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA