Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888675
Identifier: 15888675
GI number: 15888675
Start: 1344809
End: 1345177
Strand: Direct
Name: 15888675
Synonym: Atu1349
Alternate gene names: NA
Gene position: 1344809-1345177 (Clockwise)
Preceding gene: 15888673
Following gene: 159184724
Centisome position: 47.33
GC content: 59.08
Gene sequence:
>369_bases ATGGCAGCGGTCAGTATTGTTTTCGAAGCTCCCGATAATTACGGCGGCGCACCTGCGGTCAGCAAGAAGCCAATCGATTT CGATCATCTTGCGCAGCAGACGATGGGTGACAAGGATCTGGAAATCGAGGTGCTGCAGCTATTCAGCCGCAGTGCCCGCG CAGCCCTGCATGAAATGGCGGGCGCAGACAACAAGACCGTTACGGCCACCGCCCACCGTCTTAAGGGATCGGCGCAGGCC GTTGGCGCCTCCGCCGTTTCCGCGGCCGCGGCAGCGGTGGAGGAGAAGGGCAATGATAGCGCGCTGATCGCAAAACTCGC TGCAGCTATTGTCGAAGCCGAAAATTTTATCCTCAAGCTCTGCCGCTGA
Upstream 100 bases:
>100_bases CTGCGTCACGCCGTAATTTAAGCCGATAGCAGCCGCCAGCATGCGTGAATACGACACATATGTGACATGAAACAGGAAAC GGCGAGACAGGATTCCAGCC
Downstream 100 bases:
>100_bases GACGCAAGCGATCAAAATTTGCCATTTTGCAAGGCCGGTTCAGCCTGTGTGTCCCGAAGCGGGTTGCCAAGGCGGGTCGG CCTTTCTATGTGTTTAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Hpt Domain-Containing Protein
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAAVSIVFEAPDNYGGAPAVSKKPIDFDHLAQQTMGDKDLEIEVLQLFSRSARAALHEMAGADNKTVTATAHRLKGSAQA VGASAVSAAAAAVEEKGNDSALIAKLAAAIVEAENFILKLCR
Sequences:
>Translated_122_residues MAAVSIVFEAPDNYGGAPAVSKKPIDFDHLAQQTMGDKDLEIEVLQLFSRSARAALHEMAGADNKTVTATAHRLKGSAQA VGASAVSAAAAAVEEKGNDSALIAKLAAAIVEAENFILKLCR >Mature_121_residues AAVSIVFEAPDNYGGAPAVSKKPIDFDHLAQQTMGDKDLEIEVLQLFSRSARAALHEMAGADNKTVTATAHRLKGSAQAV GASAVSAAAAAVEEKGNDSALIAKLAAAIVEAENFILKLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12620; Mature: 12489
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSIVFEAPDNYGGAPAVSKKPIDFDHLAQQTMGDKDLEIEVLQLFSRSARAALHEMA CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GADNKTVTATAHRLKGSAQAVGASAVSAAAAAVEEKGNDSALIAKLAAAIVEAENFILKL CCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH CR CC >Mature Secondary Structure AAVSIVFEAPDNYGGAPAVSKKPIDFDHLAQQTMGDKDLEIEVLQLFSRSARAALHEMA CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GADNKTVTATAHRLKGSAQAVGASAVSAAAAAVEEKGNDSALIAKLAAAIVEAENFILKL CCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH CR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA