Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ppnK [H]
Identifier: 15888671
GI number: 15888671
Start: 1333726
End: 1334499
Strand: Reverse
Name: ppnK [H]
Synonym: Atu1345
Alternate gene names: 15888671
Gene position: 1334499-1333726 (Counterclockwise)
Preceding gene: 159184723
Following gene: 15888670
Centisome position: 46.96
GC content: 59.56
Gene sequence:
>774_bases ATGTCGCATTCTACCTATTCACTGTCCTTCGTCGCCTCCCCATCCGAGGAGGCGCAGACGGCGTTGAAAGAGCTGAAAGC CGTTTATAGCGATACACCGTTCGAAGAGGCCGATGTGATCGTTGCGCTTGGCGGCGACGGGTTCATGCTGCAAATCCTCA ACGAAACGATGAATTCCGGCAAGCGTGTCTATGGCATGAACCGGGGGTCCGTCGGGTTCCTGATGAATGACTTCCGGGTG GAAGGCCTCATCCAGCGCATCGCGGTGGCGAGCGGCAATGATTTCCATCCCCTGCGCATGACGACGACGGATTCCGATGG CGACGAGTTTACCGCGCTCGCCATGAACGAAGTCAGCCTGTTTCGCCAGTCGCATCAGGCCGCCAAGCTGCGTGTCGAGG TGGATGGCAAGGTGCGGCTGGAAGAGCTGATCTGCGACGGTATGATGGTGGCGACGCCAGCAGGGTCGACGGCCTACAAT TTCTCCGCCCACGGGCCGATCCTGCCGCTGGAATCACCGCTTCTGGCGCTGACCCCGGTCAGCGCGTTCCGGCCGCGACG CTGGCGCGGGGCGCTTCTGCCGAATAAGGTAACCGTCGATATTCATGTCCTGGAGCGCGACAAGCGGCCTGTGAATGCCG TGGCCGATCACACCGAGGTGAAATCCGTTCGTCACGTCAGGATCGCACAATCACAGGACAGGACGGCGAAAATTCTCTCG GATCCGGATCGTTCATGGTCGGACCGGGTTCTCGCTGAACAGTTCAACAATTAA
Upstream 100 bases:
>100_bases TCCTCCTCTTGGTTGAGGTTTCAAGATTTCGAGCTGCTTCAACGGGTTACAGCATCCTGCGCGGACCGGTTCCGGTCTGC GCCGTTGTCGAGGGAAGCGG
Downstream 100 bases:
>100_bases ACCAACCACCACGATTGCCATGCACGTCAAAAAAACGCTCCTCGCTGCTCTGCTTCTTGCCACGACCGTCCTGCCCGCGC GGGCGCAGACGCAGGCGATC
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSHSTYSLSFVASPSEEAQTALKELKAVYSDTPFEEADVIVALGGDGFMLQILNETMNSGKRVYGMNRGSVGFLMNDFRV EGLIQRIAVASGNDFHPLRMTTTDSDGDEFTALAMNEVSLFRQSHQAAKLRVEVDGKVRLEELICDGMMVATPAGSTAYN FSAHGPILPLESPLLALTPVSAFRPRRWRGALLPNKVTVDIHVLERDKRPVNAVADHTEVKSVRHVRIAQSQDRTAKILS DPDRSWSDRVLAEQFNN
Sequences:
>Translated_257_residues MSHSTYSLSFVASPSEEAQTALKELKAVYSDTPFEEADVIVALGGDGFMLQILNETMNSGKRVYGMNRGSVGFLMNDFRV EGLIQRIAVASGNDFHPLRMTTTDSDGDEFTALAMNEVSLFRQSHQAAKLRVEVDGKVRLEELICDGMMVATPAGSTAYN FSAHGPILPLESPLLALTPVSAFRPRRWRGALLPNKVTVDIHVLERDKRPVNAVADHTEVKSVRHVRIAQSQDRTAKILS DPDRSWSDRVLAEQFNN >Mature_256_residues SHSTYSLSFVASPSEEAQTALKELKAVYSDTPFEEADVIVALGGDGFMLQILNETMNSGKRVYGMNRGSVGFLMNDFRVE GLIQRIAVASGNDFHPLRMTTTDSDGDEFTALAMNEVSLFRQSHQAAKLRVEVDGKVRLEELICDGMMVATPAGSTAYNF SAHGPILPLESPLLALTPVSAFRPRRWRGALLPNKVTVDIHVLERDKRPVNAVADHTEVKSVRHVRIAQSQDRTAKILSD PDRSWSDRVLAEQFNN
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788968, Length=154, Percent_Identity=31.8181818181818, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6325068, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 28403; Mature: 28271
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSTYSLSFVASPSEEAQTALKELKAVYSDTPFEEADVIVALGGDGFMLQILNETMNSG CCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEHHHHHHHHHCC KRVYGMNRGSVGFLMNDFRVEGLIQRIAVASGNDFHPLRMTTTDSDGDEFTALAMNEVSL CEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEHHHHHHH FRQSHQAAKLRVEVDGKVRLEELICDGMMVATPAGSTAYNFSAHGPILPLESPLLALTPV HHHCCCCEEEEEEECCCEEHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCCEEEECCH SAFRPRRWRGALLPNKVTVDIHVLERDKRPVNAVADHTEVKSVRHVRIAQSQDRTAKILS HHCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHC DPDRSWSDRVLAEQFNN CCCCCHHHHHHHHHCCC >Mature Secondary Structure SHSTYSLSFVASPSEEAQTALKELKAVYSDTPFEEADVIVALGGDGFMLQILNETMNSG CCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEHHHHHHHHHCC KRVYGMNRGSVGFLMNDFRVEGLIQRIAVASGNDFHPLRMTTTDSDGDEFTALAMNEVSL CEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEHHHHHHH FRQSHQAAKLRVEVDGKVRLEELICDGMMVATPAGSTAYNFSAHGPILPLESPLLALTPV HHHCCCCEEEEEEECCCEEHHHHHHCCEEEECCCCCCEEECCCCCCCCCCCCCEEEECCH SAFRPRRWRGALLPNKVTVDIHVLERDKRPVNAVADHTEVKSVRHVRIAQSQDRTAKILS HHCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHC DPDRSWSDRVLAEQFNN CCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]