Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888622
Identifier: 15888622
GI number: 15888622
Start: 1285967
End: 1286275
Strand: Reverse
Name: 15888622
Synonym: Atu8152
Alternate gene names: NA
Gene position: 1286275-1285967 (Counterclockwise)
Preceding gene: 159184701
Following gene: 159184698
Centisome position: 45.27
GC content: 60.84
Gene sequence:
>309_bases ATGCTGCGCGAGACAAAAAACAAAGGCAATGCCGGCCAGGATCCGCAAGAAACAGCGGCCGCCATACTTGGCTGGCTGGC AAACGAACCGGACATGCTGTCGCGTTTTCTGGCCTTGAGCGGGTTACAGGCCAATATGCTGCGCCAGGCCGTCAATGATC CCGGCTTTCTGGCGGGGCTGACGGATTTCCTGATGAGCCACGAGCCGGACCTGATGGCGTTCTGCGCCGCCACCGATACA CCCCCCGAAACGGTGGCCGCCGCCTGGCACCATTTTTCCGGGCCGGGACTGGATTCAGGTGTGTATTGA
Upstream 100 bases:
>100_bases TCATCCAGACATATAAGTTGCCAGAGAACCGATTCCATCGTCCATTCGTTGCGCAAGGCTAGAGGGATTTGGTTTCAAAA TAGGTAACTTCGGGGAAGAA
Downstream 100 bases:
>100_bases CGGGACGCCCCTTGAGCGGCCACCACAGCCGGAGTATGGTTGGCTACGTTCTGGTTTTGTTTTCGACCCATGTCCACGTC GCACCGCTATGATCCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MLRETKNKGNAGQDPQETAAAILGWLANEPDMLSRFLALSGLQANMLRQAVNDPGFLAGLTDFLMSHEPDLMAFCAATDT PPETVAAAWHHFSGPGLDSGVY
Sequences:
>Translated_102_residues MLRETKNKGNAGQDPQETAAAILGWLANEPDMLSRFLALSGLQANMLRQAVNDPGFLAGLTDFLMSHEPDLMAFCAATDT PPETVAAAWHHFSGPGLDSGVY >Mature_102_residues MLRETKNKGNAGQDPQETAAAILGWLANEPDMLSRFLALSGLQANMLRQAVNDPGFLAGLTDFLMSHEPDLMAFCAATDT PPETVAAAWHHFSGPGLDSGVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10902; Mature: 10902
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRETKNKGNAGQDPQETAAAILGWLANEPDMLSRFLALSGLQANMLRQAVNDPGFLAGL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHH TDFLMSHEPDLMAFCAATDTPPETVAAAWHHFSGPGLDSGVY HHHHHCCCCCCEEHCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLRETKNKGNAGQDPQETAAAILGWLANEPDMLSRFLALSGLQANMLRQAVNDPGFLAGL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHH TDFLMSHEPDLMAFCAATDTPPETVAAAWHHFSGPGLDSGVY HHHHHCCCCCCEEHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA