Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888583

Identifier: 15888583

GI number: 15888583

Start: 1241666

End: 1242007

Strand: Direct

Name: 15888583

Synonym: Atu1253

Alternate gene names: NA

Gene position: 1241666-1242007 (Clockwise)

Preceding gene: 15888582

Following gene: 159184685

Centisome position: 43.7

GC content: 56.43

Gene sequence:

>342_bases
ATGACGAATTTTCTGTCTTTTGATGATGTCACCGCAGTGGAGCATGGCGCACCCGCGCCGGAAAGACTGATTTCCGGTGA
TCCCAGATTCACGACATGGAATCTCGAAGAGGCTTCCGGTGGTATCTATGCCGGCATCTGGCAGTCCACGCCTGGAAAAT
GGCGGGTGGTCTATGATGAATGGGAGTATTTCAACATTCTCGAAGGCCATTCCATCCTGACCGAAGACGGCGGCGCACCG
CGCGATCTGAGGCCGGGTGACCGCTTGGTCCTGCGCCCGGGCTTCACAGGCACCTGGGAAGTTTTGGAAACCACGCGGAA
GGATTACGTCATCCGGCTTTGA

Upstream 100 bases:

>100_bases
AAAGCAATTTTAAGTTGTATATAGGGTTGAAGCCGTTTGACGAAGCGCTCACAATCGCGCAAAGCTATGGGACCAACCAC
ATCTGACGGACCGGGATACC

Downstream 100 bases:

>100_bases
GGCGGGATGACTGTTTGAAGCTGCTATTGCCCATCGAATTTGAGAATTGATGGAAGGAGCCCGGGAAAGCGGGCTTCCAT
ATCCTCGAGACGGACGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTNFLSFDDVTAVEHGAPAPERLISGDPRFTTWNLEEASGGIYAGIWQSTPGKWRVVYDEWEYFNILEGHSILTEDGGAP
RDLRPGDRLVLRPGFTGTWEVLETTRKDYVIRL

Sequences:

>Translated_113_residues
MTNFLSFDDVTAVEHGAPAPERLISGDPRFTTWNLEEASGGIYAGIWQSTPGKWRVVYDEWEYFNILEGHSILTEDGGAP
RDLRPGDRLVLRPGFTGTWEVLETTRKDYVIRL
>Mature_112_residues
TNFLSFDDVTAVEHGAPAPERLISGDPRFTTWNLEEASGGIYAGIWQSTPGKWRVVYDEWEYFNILEGHSILTEDGGAPR
DLRPGDRLVLRPGFTGTWEVLETTRKDYVIRL

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12829; Mature: 12698

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFLSFDDVTAVEHGAPAPERLISGDPRFTTWNLEEASGGIYAGIWQSTPGKWRVVYDE
CCCCCCCCCCEECCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEC
WEYFNILEGHSILTEDGGAPRDLRPGDRLVLRPGFTGTWEVLETTRKDYVIRL
CCEEEEECCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
TNFLSFDDVTAVEHGAPAPERLISGDPRFTTWNLEEASGGIYAGIWQSTPGKWRVVYDE
CCCCCCCCCEECCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEC
WEYFNILEGHSILTEDGGAPRDLRPGDRLVLRPGFTGTWEVLETTRKDYVIRL
CCEEEEECCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA