Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888539
Identifier: 15888539
GI number: 15888539
Start: 1196713
End: 1196967
Strand: Reverse
Name: 15888539
Synonym: Atu1203
Alternate gene names: NA
Gene position: 1196967-1196713 (Counterclockwise)
Preceding gene: 159184663
Following gene: 159184655
Centisome position: 42.12
GC content: 61.18
Gene sequence:
>255_bases ATGTGCACCGCTCATCAGCATCATGCCGAAACCACCACCGCACCTGATAATGCAGGCCTTTCTTTCCACGTTGAAGACAT GACCTGCGGTCACTGCGCCGGCGTGATCAAGGGCGCGATCGAAAAGACCGTTCCCGGTGCTGCTGTGCATGCAGACCCTG CAAGCCGCACGGTCGTGGTCGGCGGCGTCTCCGACGCGGCACACATTGCTGAAATCATCACCGCCGCTGGTTATACGCCG GAAGCGCGCGCCTGA
Upstream 100 bases:
>100_bases GAAACAGATGTTGCGCAGGGGCGAATAAAGCGCTTGACCTTCCCACGTTGGAATAGTTCAGGCTCCACCTGTTATAATTC CAAACCATGGAGAACCGCCT
Downstream 100 bases:
>100_bases TCCGAAGAGATACCGGCGGCGGCTTTTCCATGCGGCCGTCGGTTTGCCCTATGCCCGAGTGCACGCTCCATTTGCGTGAC GCCGTTGGATGCCTTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MCTAHQHHAETTTAPDNAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP EARA
Sequences:
>Translated_84_residues MCTAHQHHAETTTAPDNAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP EARA >Mature_84_residues MCTAHQHHAETTTAPDNAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP EARA
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8474; Mature: 8474
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTAHQHHAETTTAPDNAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVV CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEE GGVSDAAHIAEIITAAGYTPEARA ECCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MCTAHQHHAETTTAPDNAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVV CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEE GGVSDAAHIAEIITAAGYTPEARA ECCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA