Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888432

Identifier: 15888432

GI number: 15888432

Start: 1080634

End: 1081608

Strand: Reverse

Name: 15888432

Synonym: Atu1089

Alternate gene names: NA

Gene position: 1081608-1080634 (Counterclockwise)

Preceding gene: 159184609

Following gene: 15888431

Centisome position: 38.06

GC content: 60.82

Gene sequence:

>975_bases
GTGCAAAAGTTGAACCAGACAGTGCTGATCTCCGGCGTTCTCGCCGGCATATGCGCCGCGTTTTTAACGCTTGGCGCAAC
GGCACAGTCGTCGCTTTCTTTCCTGCTTTATGCCGGTTCGGCCATGCCCATCTTCATCGCCGGCATGGGCTGGGGCAACC
GCGCCGCCATTATCGCTATCATCACCACCGCCATCATCGGCGCGCTCGTCATGTCGCCGCTTTTTGCGCTGACCATTGCG
ATCTTCACGCTGATCCCGGCGGGCTGGCTTTCGCATCTCGCCAATCTGGCGCGCCCGGCCTCCGAACTCGGCGGCCCGGA
TGATCTGCTCGCCTGGTATCCGCTGTCCGGCATCGTGCTGCATCTGTGCATTCTGGTCTCCGTCGCCGTCGTCATTCTCG
GCTGGATGATCGGTTACGGTCCCGATCTCGTTGCCCGCATGGTCGATATCATGATGACCTCGGTACAGAACCGCGAACCC
CTGTTCGAACCCAATGCCGAAGCACTTACCCAGACGAAGTCGCTGCTGGTGCTGATGCTGCCGATCGTCCAGGGCGGTCT
TTGGGTCATCCTGCTGTTTGCGGCCTATTATGTCGCGACCCGGCTGGTCGGCTCCTTCGGCAAGGGCCTTCGCCCGCGCG
AAGACATTGCTTCTGCGCTGCGCATGCACCGCAACGCGATCTTCATCTTTCTTGGCGGCATCGTCGCCATGTTCTTCGGG
GGCGTCGCCGCCATGATTGGTGCCGTCATCTGCGGCACCTTCGGCGCGGGCTTCCTGATGGCGGGTTATGCCTCGCTGCA
TAAAAAGGCGCGCGGCAAGGACTGGCGGCTGCCGGTTCTCATCCTCGCTTATCTCTCGGCGGTCTTTGTCTTTCCGCTGT
TCATCATTCTCGTGCTCGGCCTGAGCGACGTGCGCAGCACGATCTCTCTGACGCCGGCACGGAAAAACGACACAACGAAC
GAAACCAAACCATAG

Upstream 100 bases:

>100_bases
TCCTTCCGCGTTGGGCGCGGATCGATACCATAAAACCCATGTTGGGGATGAGGCTCTCAGGAGCGATCCTCTAACTGCTT
AGTTTCAGCAGGACAGCGAC

Downstream 100 bases:

>100_bases
AAAGGATCAAGAAGATGGACGTTATTCTTCTCGAACGCATCAACAAGCTCGGTCAGATGGGCGAAACCGTCAAGGTTCGC
GACGGTTATGCCCGTAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MQKLNQTVLISGVLAGICAAFLTLGATAQSSLSFLLYAGSAMPIFIAGMGWGNRAAIIAIITTAIIGALVMSPLFALTIA
IFTLIPAGWLSHLANLARPASELGGPDDLLAWYPLSGIVLHLCILVSVAVVILGWMIGYGPDLVARMVDIMMTSVQNREP
LFEPNAEALTQTKSLLVLMLPIVQGGLWVILLFAAYYVATRLVGSFGKGLRPREDIASALRMHRNAIFIFLGGIVAMFFG
GVAAMIGAVICGTFGAGFLMAGYASLHKKARGKDWRLPVLILAYLSAVFVFPLFIILVLGLSDVRSTISLTPARKNDTTN
ETKP

Sequences:

>Translated_324_residues
MQKLNQTVLISGVLAGICAAFLTLGATAQSSLSFLLYAGSAMPIFIAGMGWGNRAAIIAIITTAIIGALVMSPLFALTIA
IFTLIPAGWLSHLANLARPASELGGPDDLLAWYPLSGIVLHLCILVSVAVVILGWMIGYGPDLVARMVDIMMTSVQNREP
LFEPNAEALTQTKSLLVLMLPIVQGGLWVILLFAAYYVATRLVGSFGKGLRPREDIASALRMHRNAIFIFLGGIVAMFFG
GVAAMIGAVICGTFGAGFLMAGYASLHKKARGKDWRLPVLILAYLSAVFVFPLFIILVLGLSDVRSTISLTPARKNDTTN
ETKP
>Mature_324_residues
MQKLNQTVLISGVLAGICAAFLTLGATAQSSLSFLLYAGSAMPIFIAGMGWGNRAAIIAIITTAIIGALVMSPLFALTIA
IFTLIPAGWLSHLANLARPASELGGPDDLLAWYPLSGIVLHLCILVSVAVVILGWMIGYGPDLVARMVDIMMTSVQNREP
LFEPNAEALTQTKSLLVLMLPIVQGGLWVILLFAAYYVATRLVGSFGKGLRPREDIASALRMHRNAIFIFLGGIVAMFFG
GVAAMIGAVICGTFGAGFLMAGYASLHKKARGKDWRLPVLILAYLSAVFVFPLFIILVLGLSDVRSTISLTPARKNDTTN
ETKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34495; Mature: 34495

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLNQTVLISGVLAGICAAFLTLGATAQSSLSFLLYAGSAMPIFIAGMGWGNRAAIIAI
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
ITTAIIGALVMSPLFALTIAIFTLIPAGWLSHLANLARPASELGGPDDLLAWYPLSGIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCHHHHHH
HLCILVSVAVVILGWMIGYGPDLVARMVDIMMTSVQNREPLFEPNAEALTQTKSLLVLML
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
PIVQGGLWVILLFAAYYVATRLVGSFGKGLRPREDIASALRMHRNAIFIFLGGIVAMFFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAAMIGAVICGTFGAGFLMAGYASLHKKARGKDWRLPVLILAYLSAVFVFPLFIILVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSDVRSTISLTPARKNDTTNETKP
HHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKLNQTVLISGVLAGICAAFLTLGATAQSSLSFLLYAGSAMPIFIAGMGWGNRAAIIAI
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
ITTAIIGALVMSPLFALTIAIFTLIPAGWLSHLANLARPASELGGPDDLLAWYPLSGIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCHHHHHH
HLCILVSVAVVILGWMIGYGPDLVARMVDIMMTSVQNREPLFEPNAEALTQTKSLLVLML
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
PIVQGGLWVILLFAAYYVATRLVGSFGKGLRPREDIASALRMHRNAIFIFLGGIVAMFFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAAMIGAVICGTFGAGFLMAGYASLHKKARGKDWRLPVLILAYLSAVFVFPLFIILVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSDVRSTISLTPARKNDTTNETKP
HHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA