Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is mhqO [H]
Identifier: 15888387
GI number: 15888387
Start: 1038191
End: 1039750
Strand: Reverse
Name: mhqO [H]
Synonym: Atu1045
Alternate gene names: 15888387
Gene position: 1039750-1038191 (Counterclockwise)
Preceding gene: 15888391
Following gene: 159184592
Centisome position: 36.59
GC content: 62.05
Gene sequence:
>1560_bases ATGAATTCTGCACTTGGCATACACCACATCACCATGATCACCCGGAAGGTGCAGGCGAATGTGGATTTTTACGCCGGCTT TCTGGGGCTGCGGCTGGTCAAGCGCACGGCCGGCTTCGAAGACGCCATGCAGCTGCACCTGCTTTACGGCGACGATATTG GCTCTCCCGGCTCGCTATTGACCTTTCTGGTCTGGGAAGATGGCGGCCAGGGCCGCGTCGGTTACGGGCAGACGCTGGAA ATTTCCGTGGCGATCGATCCCGCGGCGATCGGATTCTGGCTGACACGGGCGCTGAAATTCGGCCTGCGCGCCGAGGGACC GTCGGATGAATTCGGCGCGCCCGTCATTCGGTTGAAAGACCCTGATGGCCTGATTGTCAAGCTGGTCGGCACCCATGCCT TTGCCGATGCGACGCCGCATGTGACGGCCGATATCTCCGCCGAAGACGCCATTTGCCGAATCTATGGCGCAACCATGCTG AGCGAGGTGCCGGAAGAAACCGTGGCGTTTCTGGAAAAACACTTCGGTTACCGGCAGGAAAGCCAGGCGGGCGCGATCCG CCGGCTCGTTTCCGATAGCGGCGACATCATCGATGTGCGCGACGCGACCGGCTTCTGGTCCAGCGCGCCCGGCACCGGCA CAGTCGACCACATCGCCTTCCGTGCGAAGGACATGGATGAGCTGAACACGGTTCTCACCGGCTTGAAATCGCTGAATTCC AGCACCACCAATGCCCATGACCGGAAATATTTCCACTCGCTCTACGTCCGCGAACCGGGCGGCGTGCTGATTGAAATGGC GACCGATGCGCCCGGCATGACGGTGGACGAGCCGCTGGCGACGCTTGGCGAAGAACTGTTCATTCCACCGCTGTTCATGA AGGATGAAGCGGATGTACGCGTTGCCCTGCCGCAATTTGCGATGCCGGGCGAAGAGCGGATCGTTTATCGCGACCTGCCC TTCGTGCACCGTTTCTACACGCCGGAGGAGCCTGACGGCAGCACCATCATCCTGCTGCACGGTTCCGGCGGCAGCGAAAC GAGCCTGATGCCGCTGGCGCACCGGGCGGCCCCCGGCGCTACCCTTCTCGGCGTGCGCGGACGCAGCACGGAAGAAGACA TCGCCCGCTGGTTCCGGCGCTTCCCCGATTTCAGCTTCGACCAGAAGGATATCCTCTTGGAAGCGGAGGCCTTTGCCGCC TTCGTGGAAGGGGCAATCCGCGCCTATGGTCTCGATCGCTCGAAACTGCGGTTCATCGGCCATTCCAATGGCGCGAACTT CTATGCGGCCTTTGCCGCGCTTTATCCGGAGCTTGCCGGCGACGCCCTGCTCTACCGCCCGATGCCGGTTCTTGAAACAT GGCCGCAGAGCGATCTTTCCGGCCGCAATTTCGTGCTCGTTGCGGGAGAACGCGACAAATACCGCGACGGGGCAAGCGAG CTGCAAGGCAGACTTACGGCAAGCGGCGCGAGGGCTGAGGTGGAAACGGTCGAGGATGGACACGAATTGGGGCTTCCCGA TCTCGAAGCAGCACGGCGCTGGCTGTCGGATGCGTCCTGA
Upstream 100 bases:
>100_bases ACACGGAGAACACATCGTTCTCATTTGCCGGGGTTGCGGATCAGGGGCAGCTTGGGACAAATAGGGCCACAAACAGCAGG CGAAACGGCGGGACGGCGAC
Downstream 100 bases:
>100_bases TACGAGGCGGTTCGGGTGTCACCCACGAGTGGCACTCGCTCGCTCTCCCCGTTACCCACACCTCCATCAACCGGGCCTTG CATAAATTCACCAAAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MNSALGIHHITMITRKVQANVDFYAGFLGLRLVKRTAGFEDAMQLHLLYGDDIGSPGSLLTFLVWEDGGQGRVGYGQTLE ISVAIDPAAIGFWLTRALKFGLRAEGPSDEFGAPVIRLKDPDGLIVKLVGTHAFADATPHVTADISAEDAICRIYGATML SEVPEETVAFLEKHFGYRQESQAGAIRRLVSDSGDIIDVRDATGFWSSAPGTGTVDHIAFRAKDMDELNTVLTGLKSLNS STTNAHDRKYFHSLYVREPGGVLIEMATDAPGMTVDEPLATLGEELFIPPLFMKDEADVRVALPQFAMPGEERIVYRDLP FVHRFYTPEEPDGSTIILLHGSGGSETSLMPLAHRAAPGATLLGVRGRSTEEDIARWFRRFPDFSFDQKDILLEAEAFAA FVEGAIRAYGLDRSKLRFIGHSNGANFYAAFAALYPELAGDALLYRPMPVLETWPQSDLSGRNFVLVAGERDKYRDGASE LQGRLTASGARAEVETVEDGHELGLPDLEAARRWLSDAS
Sequences:
>Translated_519_residues MNSALGIHHITMITRKVQANVDFYAGFLGLRLVKRTAGFEDAMQLHLLYGDDIGSPGSLLTFLVWEDGGQGRVGYGQTLE ISVAIDPAAIGFWLTRALKFGLRAEGPSDEFGAPVIRLKDPDGLIVKLVGTHAFADATPHVTADISAEDAICRIYGATML SEVPEETVAFLEKHFGYRQESQAGAIRRLVSDSGDIIDVRDATGFWSSAPGTGTVDHIAFRAKDMDELNTVLTGLKSLNS STTNAHDRKYFHSLYVREPGGVLIEMATDAPGMTVDEPLATLGEELFIPPLFMKDEADVRVALPQFAMPGEERIVYRDLP FVHRFYTPEEPDGSTIILLHGSGGSETSLMPLAHRAAPGATLLGVRGRSTEEDIARWFRRFPDFSFDQKDILLEAEAFAA FVEGAIRAYGLDRSKLRFIGHSNGANFYAAFAALYPELAGDALLYRPMPVLETWPQSDLSGRNFVLVAGERDKYRDGASE LQGRLTASGARAEVETVEDGHELGLPDLEAARRWLSDAS >Mature_519_residues MNSALGIHHITMITRKVQANVDFYAGFLGLRLVKRTAGFEDAMQLHLLYGDDIGSPGSLLTFLVWEDGGQGRVGYGQTLE ISVAIDPAAIGFWLTRALKFGLRAEGPSDEFGAPVIRLKDPDGLIVKLVGTHAFADATPHVTADISAEDAICRIYGATML SEVPEETVAFLEKHFGYRQESQAGAIRRLVSDSGDIIDVRDATGFWSSAPGTGTVDHIAFRAKDMDELNTVLTGLKSLNS STTNAHDRKYFHSLYVREPGGVLIEMATDAPGMTVDEPLATLGEELFIPPLFMKDEADVRVALPQFAMPGEERIVYRDLP FVHRFYTPEEPDGSTIILLHGSGGSETSLMPLAHRAAPGATLLGVRGRSTEEDIARWFRRFPDFSFDQKDILLEAEAFAA FVEGAIRAYGLDRSKLRFIGHSNGANFYAAFAALYPELAGDALLYRPMPVLETWPQSDLSGRNFVLVAGERDKYRDGASE LQGRLTASGARAEVETVEDGHELGLPDLEAARRWLSDAS
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 56713; Mature: 56713
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSALGIHHITMITRKVQANVDFYAGFLGLRLVKRTAGFEDAMQLHLLYGDDIGSPGSLL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCEE TFLVWEDGGQGRVGYGQTLEISVAIDPAAIGFWLTRALKFGLRAEGPSDEFGAPVIRLKD EEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC PDGLIVKLVGTHAFADATPHVTADISAEDAICRIYGATMLSEVPEETVAFLEKHFGYRQE CCCEEEEEECCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC SQAGAIRRLVSDSGDIIDVRDATGFWSSAPGTGTVDHIAFRAKDMDELNTVLTGLKSLNS HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHCCC STTNAHDRKYFHSLYVREPGGVLIEMATDAPGMTVDEPLATLGEELFIPPLFMKDEADVR CCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCHHHHHCCHHHCCCCEEECCCCCEE VALPQFAMPGEERIVYRDLPFVHRFYTPEEPDGSTIILLHGSGGSETSLMPLAHRAAPGA EECCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHCCCCC TLLGVRGRSTEEDIARWFRRFPDFSFDQKDILLEAEAFAAFVEGAIRAYGLDRSKLRFIG EEEEECCCCCHHHHHHHHHHCCCCCCCCHHEEEEHHHHHHHHHHHHHHCCCCHHHEEEEE HSNGANFYAAFAALYPELAGDALLYRPMPVLETWPQSDLSGRNFVLVAGERDKYRDGASE CCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCCCCCEEEEEECCCCHHCCCHHH LQGRLTASGARAEVETVEDGHELGLPDLEAARRWLSDAS HCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MNSALGIHHITMITRKVQANVDFYAGFLGLRLVKRTAGFEDAMQLHLLYGDDIGSPGSLL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCEE TFLVWEDGGQGRVGYGQTLEISVAIDPAAIGFWLTRALKFGLRAEGPSDEFGAPVIRLKD EEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC PDGLIVKLVGTHAFADATPHVTADISAEDAICRIYGATMLSEVPEETVAFLEKHFGYRQE CCCEEEEEECCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC SQAGAIRRLVSDSGDIIDVRDATGFWSSAPGTGTVDHIAFRAKDMDELNTVLTGLKSLNS HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHCCC STTNAHDRKYFHSLYVREPGGVLIEMATDAPGMTVDEPLATLGEELFIPPLFMKDEADVR CCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCHHHHHCCHHHCCCCEEECCCCCEE VALPQFAMPGEERIVYRDLPFVHRFYTPEEPDGSTIILLHGSGGSETSLMPLAHRAAPGA EECCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHCCCCC TLLGVRGRSTEEDIARWFRRFPDFSFDQKDILLEAEAFAAFVEGAIRAYGLDRSKLRFIG EEEEECCCCCHHHHHHHHHHCCCCCCCCHHEEEEHHHHHHHHHHHHHHCCCCHHHEEEEE HSNGANFYAAFAALYPELAGDALLYRPMPVLETWPQSDLSGRNFVLVAGERDKYRDGASE CCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCCCCCEEEEEECCCCHHCCCHHH LQGRLTASGARAEVETVEDGHELGLPDLEAARRWLSDAS HCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]