Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888356

Identifier: 15888356

GI number: 15888356

Start: 1007540

End: 1007887

Strand: Reverse

Name: 15888356

Synonym: Atu8145

Alternate gene names: NA

Gene position: 1007887-1007540 (Counterclockwise)

Preceding gene: 15888359

Following gene: 159184577

Centisome position: 35.47

GC content: 54.89

Gene sequence:

>348_bases
ATGGCTCTACATATGGATATCAGTCAGAACGTTCCCCAGGACGAGAAGTATGAGAAATTTCCGATCGACCGGCCCGGCAA
GATCACCTTCATCGGGCATCATCTCAGCGCCAAGGACACCATGCGTTGCCTGGTGCGCAGCATTTCCCTCTATGGCGCGG
AACTGGATGTGAGCCCCGAACTGGAAATGCCGACCAATTTCTATCTGGAGATTCTCGGTATTCGCGATGAGATCGGCTGC
ACGCTGATCCGCCGGGAGGAAGAAAAGGTCACCATCGGCTTCAACATGCTGATCGATGCGGAATTCCTGCACCATGTCCG
TCGGCTGAGTTTCGAGACCAGCGCCTGA

Upstream 100 bases:

>100_bases
GATCGACACAGACTAGAGAGAATTGCGTAGATTTCCTTCACGCCCTGGCAAGGAAGCCGCGTTAAAATAGGCACCTAAAG
AGGCAATCCGGGAGGTTGTC

Downstream 100 bases:

>100_bases
GCCGGCCGCACAGGGCCAGCGATTCGCCGACAGCGTTTCCTGCCGTGTCGTGCTAAGAAAAAACTCTTCCAAAACAGTCA
TTGGATAACCGGGCGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MALHMDISQNVPQDEKYEKFPIDRPGKITFIGHHLSAKDTMRCLVRSISLYGAELDVSPELEMPTNFYLEILGIRDEIGC
TLIRREEEKVTIGFNMLIDAEFLHHVRRLSFETSA

Sequences:

>Translated_115_residues
MALHMDISQNVPQDEKYEKFPIDRPGKITFIGHHLSAKDTMRCLVRSISLYGAELDVSPELEMPTNFYLEILGIRDEIGC
TLIRREEEKVTIGFNMLIDAEFLHHVRRLSFETSA
>Mature_114_residues
ALHMDISQNVPQDEKYEKFPIDRPGKITFIGHHLSAKDTMRCLVRSISLYGAELDVSPELEMPTNFYLEILGIRDEIGCT
LIRREEEKVTIGFNMLIDAEFLHHVRRLSFETSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13281; Mature: 13149

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALHMDISQNVPQDEKYEKFPIDRPGKITFIGHHLSAKDTMRCLVRSISLYGAELDVSPE
CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCC
LEMPTNFYLEILGIRDEIGCTLIRREEEKVTIGFNMLIDAEFLHHVRRLSFETSA
CCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEEEECHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALHMDISQNVPQDEKYEKFPIDRPGKITFIGHHLSAKDTMRCLVRSISLYGAELDVSPE
EEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCC
LEMPTNFYLEILGIRDEIGCTLIRREEEKVTIGFNMLIDAEFLHHVRRLSFETSA
CCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEEEECHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA