Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pleC [H]
Identifier: 15888325
GI number: 15888325
Start: 974550
End: 976886
Strand: Reverse
Name: pleC [H]
Synonym: Atu0982
Alternate gene names: 15888325
Gene position: 976886-974550 (Counterclockwise)
Preceding gene: 159184561
Following gene: 15888323
Centisome position: 34.38
GC content: 61.79
Gene sequence:
>2337_bases ATGACGAACGTGCGGCGGGCGACTGCGGGCGATGAGCGGCCGTATGCCAAATTTTCTGATCTTGCGGCCTGGGGCGAAAG GCTTTCCAACGACCTGATGGGTTTGATGAATGGCTCCGACCGCCCGATGCCGCAGGTCGAGACCCTGCTGAAACGCCTGA TCCCCATTCTCATCCTCGCCTTTCTTGTCGTTGTCGCGGCCTCGCGCATGCTGGGCATCGCCGCCGAATATGGCCGCATG GAAGAAGCCGCCCGCCACTCCACCGCGCTGACGGCGCTCACCGCCAAGGCAGCACTTCTCAACAATGATACGATCTTCAC CGCGCAGGATCGCACCCGCGCCGAGGCGAGCCTTGTCGCCGCTTTGCCGTCGGGCAGCCTGGCCGATGGCACTATGGTGC TGCTATCCGGCAGCAACGGCCGCATCTTCGCGGGCGCCGGCAAGGAAGCTTCGCTTTATGTCGGCACCTCGCTGCCGGCC CTGCTTCCCGAGATCGCCATCGTGCAGCGTTTCCCCGGCACGCCCGGCACCATCGAGACCAATATAGACGGCCAGCAGCA TTATGCGACGATGATCCCCTTCGGCGACGATGGCGCGATGGTGATCGCGGCACGCTCGCTGCAACCTATTCGCTCCTTCT GGCGCAGCGAAATCGCCATGAACGTCACGCTGTTTGCCGGCATCTCCTCCATCCTGCTCGTCGTGCTCTATGCCTATTAC ATGCAGGTGAAGCGCGCCCGCGATGCCGACGACATCTTCGCCGAATCGAACCTGCGGGTCGAGACGGCGCTCTCGCGCGG CCGCTGCGGCCTGTGGGATTTCGATCTCTCCAGCCGACGCATGTTCTGGTCCGGTTCGCTCTACGAAATTCTTGGGCTGC CGCCGAAGGCCGCACCGCTTTCCTTTTCCGACGCGGCCCGGATGATGCATTCCGAAGACGGCAATCTCTATGAACTGGCA CGCGCTGTCGGCTGCGGTAACCTGCGCCAGATCGACCAGATTTTTCGCATGCGTCATTCCAAAGGGCACTATGTCTGGCT GCGGGCCCGCGCCCAGGTCATCCGCACCAATAACGGTCCACGCGTCATCGGCATCGCCATGGATGTCACCGAGCAGCATC GTCTTGCCCAGCGCTACGCAGAGGCCGATCAGCGCCTTGCTGACGCCATCGAATCCACCTCGGAAGCCTTCGTGCTATGG GACAAGAACGACCGCCTCGTAATGTGCAATATCCACTACCAGAAGGCCTATGGCCTACCGGACAGCGTGCTGGTGGCCGG TACGGAAAAGAGCACGGTCTACGCTGCCGCCGCACGCCCGGTCGTGGAACGGCGCGTCGCCGATCCGGATCAGTCCGGCC TGTCGCGCACAACGGAAGTGCAGCTTGCCGATGACCGTTGGCTGCAGATCAACGAACGCCGCACCCGCGATGGCGGCCTC GTCTCCGTCGGCACAGACATCACGCTTCTGAAGCGCCATCAGGAACGGCTGCGCGATTCCGAGCGACGGCTGATGGCTAC CATCGGCGACCTCTCCGCCTCACAGCACAAGCTGGAGCGGCAGAAGACCGAGCTTTCGGACGCCAATGCCAATTACCTCG CCGAAAAAGAGCGCGCCCAGGCCGCCAACCGGGCGAAATCGGAATTCCTCGCCAATATGAGCCATGAGCTGCGCACGCCG CTCAACGCCATTCTCGGCTTCTCAGAAATCCTGCAAAACGAGATGTTCGGGCCGGTCGGCTCACCGAAATATTCCGAATA TGCCCGCGACATCCATGACAGCGGCAAACACCTCTTGAACGTCATCAACGACATTCTCGACATGTCGAAGATCGAGGCGG GCCATATGCGCATCAACCGCGAGACCATCGATCTCGCACCGCTGATCGAGGAAACCCTGCGTCTGACTGCCATTCAGGCC GAACAGAAGAACATCACCGTGCAGCAGAAGGTGTGCGCCGGGTTGACGATGCAGGGCGACCGCCGGGCCATGAAGCAGAT CATGCTCAACATTCTTTCAAATGCCGTGAAATTCACCGGCGATGGTGGCCGCATCGCGCTGCGCACCCATGTGCATGAGG CGGCGATGATCCTCACCATCGCCGATACCGGCATCGGCATTCCGGCGCAGGCCTTGCAAAAGATCGGTCAGCCCTTTGAA CAGGTGCAGAGCCAATATGCCAAGAGCCAGGGCGGCTCCGGCCTCGGACTTGCGATTTCCCGCTCGCTGGTGAAGCTGCA TGGCGGCACGATGAAAATCCGCTCGTGTGAGGGCCGCGGTACGGTGGTGACGATCATTATTCCGCATGCGGCAGGGGTGT GTGGGACGGTGCATTGA
Upstream 100 bases:
>100_bases TTTAACTTTTGCCTCTGGACACGGCGAATCGCATTTGATTCATTAGGGATATTCGAGCGGCGGCGCTTCGAATCAGTGGG GATATCTAAAAGGCGGGACA
Downstream 100 bases:
>100_bases AGCTTGGTGGGCGTGGTTTGCGCCCCTTTGCGTTGGCGAGTGCGGTTTACCCCCTCTGCCCTGCCGGGCATCTCCCCCTC AAGGGGGGAGATCAGCTAGA
Product: two component sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MTNVRRATAGDERPYAKFSDLAAWGERLSNDLMGLMNGSDRPMPQVETLLKRLIPILILAFLVVVAASRMLGIAAEYGRM EEAARHSTALTALTAKAALLNNDTIFTAQDRTRAEASLVAALPSGSLADGTMVLLSGSNGRIFAGAGKEASLYVGTSLPA LLPEIAIVQRFPGTPGTIETNIDGQQHYATMIPFGDDGAMVIAARSLQPIRSFWRSEIAMNVTLFAGISSILLVVLYAYY MQVKRARDADDIFAESNLRVETALSRGRCGLWDFDLSSRRMFWSGSLYEILGLPPKAAPLSFSDAARMMHSEDGNLYELA RAVGCGNLRQIDQIFRMRHSKGHYVWLRARAQVIRTNNGPRVIGIAMDVTEQHRLAQRYAEADQRLADAIESTSEAFVLW DKNDRLVMCNIHYQKAYGLPDSVLVAGTEKSTVYAAAARPVVERRVADPDQSGLSRTTEVQLADDRWLQINERRTRDGGL VSVGTDITLLKRHQERLRDSERRLMATIGDLSASQHKLERQKTELSDANANYLAEKERAQAANRAKSEFLANMSHELRTP LNAILGFSEILQNEMFGPVGSPKYSEYARDIHDSGKHLLNVINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQA EQKNITVQQKVCAGLTMQGDRRAMKQIMLNILSNAVKFTGDGGRIALRTHVHEAAMILTIADTGIGIPAQALQKIGQPFE QVQSQYAKSQGGSGLGLAISRSLVKLHGGTMKIRSCEGRGTVVTIIIPHAAGVCGTVH
Sequences:
>Translated_778_residues MTNVRRATAGDERPYAKFSDLAAWGERLSNDLMGLMNGSDRPMPQVETLLKRLIPILILAFLVVVAASRMLGIAAEYGRM EEAARHSTALTALTAKAALLNNDTIFTAQDRTRAEASLVAALPSGSLADGTMVLLSGSNGRIFAGAGKEASLYVGTSLPA LLPEIAIVQRFPGTPGTIETNIDGQQHYATMIPFGDDGAMVIAARSLQPIRSFWRSEIAMNVTLFAGISSILLVVLYAYY MQVKRARDADDIFAESNLRVETALSRGRCGLWDFDLSSRRMFWSGSLYEILGLPPKAAPLSFSDAARMMHSEDGNLYELA RAVGCGNLRQIDQIFRMRHSKGHYVWLRARAQVIRTNNGPRVIGIAMDVTEQHRLAQRYAEADQRLADAIESTSEAFVLW DKNDRLVMCNIHYQKAYGLPDSVLVAGTEKSTVYAAAARPVVERRVADPDQSGLSRTTEVQLADDRWLQINERRTRDGGL VSVGTDITLLKRHQERLRDSERRLMATIGDLSASQHKLERQKTELSDANANYLAEKERAQAANRAKSEFLANMSHELRTP LNAILGFSEILQNEMFGPVGSPKYSEYARDIHDSGKHLLNVINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQA EQKNITVQQKVCAGLTMQGDRRAMKQIMLNILSNAVKFTGDGGRIALRTHVHEAAMILTIADTGIGIPAQALQKIGQPFE QVQSQYAKSQGGSGLGLAISRSLVKLHGGTMKIRSCEGRGTVVTIIIPHAAGVCGTVH >Mature_777_residues TNVRRATAGDERPYAKFSDLAAWGERLSNDLMGLMNGSDRPMPQVETLLKRLIPILILAFLVVVAASRMLGIAAEYGRME EAARHSTALTALTAKAALLNNDTIFTAQDRTRAEASLVAALPSGSLADGTMVLLSGSNGRIFAGAGKEASLYVGTSLPAL LPEIAIVQRFPGTPGTIETNIDGQQHYATMIPFGDDGAMVIAARSLQPIRSFWRSEIAMNVTLFAGISSILLVVLYAYYM QVKRARDADDIFAESNLRVETALSRGRCGLWDFDLSSRRMFWSGSLYEILGLPPKAAPLSFSDAARMMHSEDGNLYELAR AVGCGNLRQIDQIFRMRHSKGHYVWLRARAQVIRTNNGPRVIGIAMDVTEQHRLAQRYAEADQRLADAIESTSEAFVLWD KNDRLVMCNIHYQKAYGLPDSVLVAGTEKSTVYAAAARPVVERRVADPDQSGLSRTTEVQLADDRWLQINERRTRDGGLV SVGTDITLLKRHQERLRDSERRLMATIGDLSASQHKLERQKTELSDANANYLAEKERAQAANRAKSEFLANMSHELRTPL NAILGFSEILQNEMFGPVGSPKYSEYARDIHDSGKHLLNVINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQAE QKNITVQQKVCAGLTMQGDRRAMKQIMLNILSNAVKFTGDGGRIALRTHVHEAAMILTIADTGIGIPAQALQKIGQPFEQ VQSQYAKSQGGSGLGLAISRSLVKLHGGTMKIRSCEGRGTVVTIIIPHAAGVCGTVH
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: COG2202
COG function: function code T; FOG: PAS/PAC domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=253, Percent_Identity=35.5731225296443, Blast_Score=145, Evalue=9e-36, Organism=Escherichia coli, GI1789149, Length=259, Percent_Identity=35.5212355212355, Blast_Score=142, Evalue=9e-35, Organism=Escherichia coli, GI87081816, Length=249, Percent_Identity=35.7429718875502, Blast_Score=136, Evalue=6e-33, Organism=Escherichia coli, GI1788713, Length=245, Percent_Identity=33.8775510204082, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=35.2459016393443, Blast_Score=122, Evalue=7e-29, Organism=Escherichia coli, GI1786912, Length=273, Percent_Identity=29.3040293040293, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI87082128, Length=250, Percent_Identity=27.2, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI1786600, Length=224, Percent_Identity=28.125, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=29.9595141700405, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=26.6187050359712, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=28.0542986425339, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1790861, Length=219, Percent_Identity=26.4840182648402, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1790346, Length=225, Percent_Identity=27.1111111111111, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1786783, Length=235, Percent_Identity=23.8297872340426, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1790300, Length=251, Percent_Identity=22.7091633466135, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787894, Length=261, Percent_Identity=27.2030651340996, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788279, Length=208, Percent_Identity=21.1538461538462, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 85415; Mature: 85284
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVRRATAGDERPYAKFSDLAAWGERLSNDLMGLMNGSDRPMPQVETLLKRLIPILILA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FLVVVAASRMLGIAAEYGRMEEAARHSTALTALTAKAALLNNDTIFTAQDRTRAEASLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHEEE ALPSGSLADGTMVLLSGSNGRIFAGAGKEASLYVGTSLPALLPEIAIVQRFPGTPGTIET ECCCCCCCCCEEEEEECCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEE NIDGQQHYATMIPFGDDGAMVIAARSLQPIRSFWRSEIAMNVTLFAGISSILLVVLYAYY CCCCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHH MQVKRARDADDIFAESNLRVETALSRGRCGLWDFDLSSRRMFWSGSLYEILGLPPKAAPL HHHHHCCCHHHHHHCCCCEEEEHHCCCCCCEEECCCCCCEEEECCCHHHHHCCCCCCCCC SFSDAARMMHSEDGNLYELARAVGCGNLRQIDQIFRMRHSKGHYVWLRARAQVIRTNNGP CHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCC RVIGIAMDVTEQHRLAQRYAEADQRLADAIESTSEAFVLWDKNDRLVMCNIHYQKAYGLP EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHHCCCC DSVLVAGTEKSTVYAAAARPVVERRVADPDQSGLSRTTEVQLADDRWLQINERRTRDGGL CCEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCE VSVGTDITLLKRHQERLRDSERRLMATIGDLSASQHKLERQKTELSDANANYLAEKERAQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH AANRAKSEFLANMSHELRTPLNAILGFSEILQNEMFGPVGSPKYSEYARDIHDSGKHLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQAEQKNITVQQKVCAGLTMQGD HHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCH RRAMKQIMLNILSNAVKFTGDGGRIALRTHVHEAAMILTIADTGIGIPAQALQKIGQPFE HHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHCCHHH QVQSQYAKSQGGSGLGLAISRSLVKLHGGTMKIRSCEGRGTVVTIIIPHAAGVCGTVH HHHHHHHHHCCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure TNVRRATAGDERPYAKFSDLAAWGERLSNDLMGLMNGSDRPMPQVETLLKRLIPILILA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FLVVVAASRMLGIAAEYGRMEEAARHSTALTALTAKAALLNNDTIFTAQDRTRAEASLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHEEE ALPSGSLADGTMVLLSGSNGRIFAGAGKEASLYVGTSLPALLPEIAIVQRFPGTPGTIET ECCCCCCCCCEEEEEECCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEE NIDGQQHYATMIPFGDDGAMVIAARSLQPIRSFWRSEIAMNVTLFAGISSILLVVLYAYY CCCCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHH MQVKRARDADDIFAESNLRVETALSRGRCGLWDFDLSSRRMFWSGSLYEILGLPPKAAPL HHHHHCCCHHHHHHCCCCEEEEHHCCCCCCEEECCCCCCEEEECCCHHHHHCCCCCCCCC SFSDAARMMHSEDGNLYELARAVGCGNLRQIDQIFRMRHSKGHYVWLRARAQVIRTNNGP CHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCC RVIGIAMDVTEQHRLAQRYAEADQRLADAIESTSEAFVLWDKNDRLVMCNIHYQKAYGLP EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHHCCCC DSVLVAGTEKSTVYAAAARPVVERRVADPDQSGLSRTTEVQLADDRWLQINERRTRDGGL CCEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCE VSVGTDITLLKRHQERLRDSERRLMATIGDLSASQHKLERQKTELSDANANYLAEKERAQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH AANRAKSEFLANMSHELRTPLNAILGFSEILQNEMFGPVGSPKYSEYARDIHDSGKHLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQAEQKNITVQQKVCAGLTMQGD HHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCH RRAMKQIMLNILSNAVKFTGDGGRIALRTHVHEAAMILTIADTGIGIPAQALQKIGQPFE HHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHCCHHH QVQSQYAKSQGGSGLGLAISRSLVKLHGGTMKIRSCEGRGTVVTIIIPHAAGVCGTVH HHHHHHHHHCCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]