Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gp35
Identifier: 15888296
GI number: 15888296
Start: 945432
End: 946004
Strand: Direct
Name: gp35
Synonym: Atu0956
Alternate gene names: NA
Gene position: 945432-946004 (Clockwise)
Preceding gene: 15888295
Following gene: 15888297
Centisome position: 33.27
GC content: 64.57
Gene sequence:
>573_bases GTGCACGTCTATCGCGGGCCGCGTCCCGCCACGCGCAAATTCGCCAGTCTGGAACTGCGCGGCATCACCAGCGATGGCAC CTTTTCCGGTTATGCCAGCGTCTTCGGCGAAGTCGATCTCGGTAAGGACGTAATCGAACGCGGCGCTTTCCGCCGCTCGA TCGAGGAACGGGGAGCGGCGGGTATCCGCATGCTCTACCAGCATGATCCGGCCGAGCCGATCGGCGCATGGCGCACCATC CGTGAGGACGAGCGTGGCCTTTATGTCGAAGGTATCCTCGCACCCGGCGTCGCCCGTTCCCGCGAGGTGCATTCGCTGAT GAAGACCGGCGCGTTGGACGGGTTGTCGATCGGCTTTCGTACTGTTCGCTCCGGCAAGGGCGCGGGCAGTGGCGTGCGGC GCATTCTGGAAGCCGATCTCTGGGAAATCTCGGTCGTGACCTTCCCGATGCTGCCTTCGGCGCGGGTCTCCGACGTCAAG CATGCCCGCTTCTTCCGGGATCGCGAGACCGAACTGGTGCGCGCGATGCGCCGTGCCGCCCGCTCGCTGTTTGACACAAC CTTCAAACGCTGA
Upstream 100 bases:
>100_bases GGCGTTCTGGTGCGCATCGCCGACCGATACGGCACACGCCCGCGCGCCTGATAGCCCTTCGCCGGCGTCGTTTTCTCCCT TCACATCGCAGGAGCTTTTC
Downstream 100 bases:
>100_bases CCCTCCAGGTATCTACGAAAAAGGAAAACCACATGACGGACCAGATGACGACACCGGCCCCGATGACCGTCGCGCCGCAG GTAAAAGCCGTGCCGGATAC
Product: phage prohead protease
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; Phage Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Pro-Head Protease
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAGIRMLYQHDPAEPIGAWRTI REDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVK HARFFRDRETELVRAMRRAARSLFDTTFKR
Sequences:
>Translated_190_residues MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAGIRMLYQHDPAEPIGAWRTI REDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVK HARFFRDRETELVRAMRRAARSLFDTTFKR >Mature_190_residues MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAGIRMLYQHDPAEPIGAWRTI REDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVK HARFFRDRETELVRAMRRAARSLFDTTFKR
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21227; Mature: 21227
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAA CCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH GIRMLYQHDPAEPIGAWRTIREDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFR HEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH TVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVKHARFFRDRETELVRAMRRAA HHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSLFDTTFKR HHHHHHHCCC >Mature Secondary Structure MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAA CCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH GIRMLYQHDPAEPIGAWRTIREDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFR HEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH TVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVKHARFFRDRETELVRAMRRAA HHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSLFDTTFKR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA