Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is gp35

Identifier: 15888296

GI number: 15888296

Start: 945432

End: 946004

Strand: Direct

Name: gp35

Synonym: Atu0956

Alternate gene names: NA

Gene position: 945432-946004 (Clockwise)

Preceding gene: 15888295

Following gene: 15888297

Centisome position: 33.27

GC content: 64.57

Gene sequence:

>573_bases
GTGCACGTCTATCGCGGGCCGCGTCCCGCCACGCGCAAATTCGCCAGTCTGGAACTGCGCGGCATCACCAGCGATGGCAC
CTTTTCCGGTTATGCCAGCGTCTTCGGCGAAGTCGATCTCGGTAAGGACGTAATCGAACGCGGCGCTTTCCGCCGCTCGA
TCGAGGAACGGGGAGCGGCGGGTATCCGCATGCTCTACCAGCATGATCCGGCCGAGCCGATCGGCGCATGGCGCACCATC
CGTGAGGACGAGCGTGGCCTTTATGTCGAAGGTATCCTCGCACCCGGCGTCGCCCGTTCCCGCGAGGTGCATTCGCTGAT
GAAGACCGGCGCGTTGGACGGGTTGTCGATCGGCTTTCGTACTGTTCGCTCCGGCAAGGGCGCGGGCAGTGGCGTGCGGC
GCATTCTGGAAGCCGATCTCTGGGAAATCTCGGTCGTGACCTTCCCGATGCTGCCTTCGGCGCGGGTCTCCGACGTCAAG
CATGCCCGCTTCTTCCGGGATCGCGAGACCGAACTGGTGCGCGCGATGCGCCGTGCCGCCCGCTCGCTGTTTGACACAAC
CTTCAAACGCTGA

Upstream 100 bases:

>100_bases
GGCGTTCTGGTGCGCATCGCCGACCGATACGGCACACGCCCGCGCGCCTGATAGCCCTTCGCCGGCGTCGTTTTCTCCCT
TCACATCGCAGGAGCTTTTC

Downstream 100 bases:

>100_bases
CCCTCCAGGTATCTACGAAAAAGGAAAACCACATGACGGACCAGATGACGACACCGGCCCCGATGACCGTCGCGCCGCAG
GTAAAAGCCGTGCCGGATAC

Product: phage prohead protease

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; Phage Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Pro-Head Protease

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAGIRMLYQHDPAEPIGAWRTI
REDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVK
HARFFRDRETELVRAMRRAARSLFDTTFKR

Sequences:

>Translated_190_residues
MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAGIRMLYQHDPAEPIGAWRTI
REDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVK
HARFFRDRETELVRAMRRAARSLFDTTFKR
>Mature_190_residues
MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAGIRMLYQHDPAEPIGAWRTI
REDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVK
HARFFRDRETELVRAMRRAARSLFDTTFKR

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21227; Mature: 21227

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAA
CCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH
GIRMLYQHDPAEPIGAWRTIREDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFR
HEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH
TVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVKHARFFRDRETELVRAMRRAA
HHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLFDTTFKR
HHHHHHHCCC
>Mature Secondary Structure
MHVYRGPRPATRKFASLELRGITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAA
CCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCH
GIRMLYQHDPAEPIGAWRTIREDERGLYVEGILAPGVARSREVHSLMKTGALDGLSIGFR
HEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH
TVRSGKGAGSGVRRILEADLWEISVVTFPMLPSARVSDVKHARFFRDRETELVRAMRRAA
HHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLFDTTFKR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA