Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888182
Identifier: 15888182
GI number: 15888182
Start: 841513
End: 842478
Strand: Direct
Name: 15888182
Synonym: Atu0841
Alternate gene names: NA
Gene position: 841513-842478 (Clockwise)
Preceding gene: 159184491
Following gene: 159184494
Centisome position: 29.61
GC content: 61.18
Gene sequence:
>966_bases ATGCCAGACAAACGCTTTCTTTCCTCAGCCTTCGGACAGGAAGAGAGCGGCACGAGCATCCCGAGCCTGACCCGGCGAAG CCTGCTGGCCGGTGCCATGGGTCTGTCGGCGGCCGCATTTTTACCACCCCGCGCGAAAGCGGGCATTGTCGCCCCCGAGG TGCTGCCACTGGAACGGCAGGATTATGCGGAGGCGCGCAAACGGTTCCACACCCATCTCCTGCGAAAGATGGCCGCGCCG GAAAAATCATCGGTTCTCGGCACGCCACCGGGCGCGGAACGCGTCACCTATCCCGGCGGGCCGGATGGTTCGATCGAACT TGTCGCCTGGCTCTCCCATTACCAGCCCTCAAAAACGTTGAAACCCGCGGTCCTGTTTCTCCACGGCGGCAATGCCACCG GTGATGGCCATTGGGCGCTGATGAAGCCCTATTGGGAAGCGGGCTATGTCGTGCTTTTACCGTCTTTCCGCGGGGAGAAC GGCCAGAGCGGCCATTATTCCGGTTTTTACAACGAAACGGCGGATGCGCTGGCGGCGGCGACCTATCTGGAAAATCTGCC CGGCATCGATAGAAACCGCTTCTTCATCGCCGGCCATTCCAATGGCGGCACGCTGACGCTTCTGGCCGCCATGAGCCGCA AGTTCCGCGCCGCAGCCCCCATCTCCGCCGGTGTCAATTCCTGGCGTTATTTCAACCGCTATAGCGACGAGATCTGTTTC GACGAGACCGACGAGCGCGAATTCATCATGCGCTCCTCCGTCTGCTTCGGCCCCAGCCTCAAATGTCCGGCGCTGCTTCT GCGCGGCACGGAGGAGCGGCCGTTTGATGCCGATCACCAGCTTTTCGTGGATCGCGCCCTGACATCCGGATTCAAGATCG ACAAAAAACTGCTGCCCGGCACCCACAATGGCGTGGTGCCGCATGCGGTGGAGGAGAGCATCCGCCTTTTCAACGCATTT GTTTGA
Upstream 100 bases:
>100_bases ATGGCTGCGAATACATTGTTGTCATTCGCGAATCCGTGATTGGACAGCTCCCCGCCGCAGTGCTGAACTGCTGTTACAAC TATCCTCCTCAGGTGACCAT
Downstream 100 bases:
>100_bases AACGCGATATGACGCCGCTGGTTAGGACGTGTGAGGTTTAGCTCTTGAGGATGGACGTCTTCGCCTGCTCCGCCCACCAG GCACCATCTTTCTTGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MPDKRFLSSAFGQEESGTSIPSLTRRSLLAGAMGLSAAAFLPPRAKAGIVAPEVLPLERQDYAEARKRFHTHLLRKMAAP EKSSVLGTPPGAERVTYPGGPDGSIELVAWLSHYQPSKTLKPAVLFLHGGNATGDGHWALMKPYWEAGYVVLLPSFRGEN GQSGHYSGFYNETADALAAATYLENLPGIDRNRFFIAGHSNGGTLTLLAAMSRKFRAAAPISAGVNSWRYFNRYSDEICF DETDEREFIMRSSVCFGPSLKCPALLLRGTEERPFDADHQLFVDRALTSGFKIDKKLLPGTHNGVVPHAVEESIRLFNAF V
Sequences:
>Translated_321_residues MPDKRFLSSAFGQEESGTSIPSLTRRSLLAGAMGLSAAAFLPPRAKAGIVAPEVLPLERQDYAEARKRFHTHLLRKMAAP EKSSVLGTPPGAERVTYPGGPDGSIELVAWLSHYQPSKTLKPAVLFLHGGNATGDGHWALMKPYWEAGYVVLLPSFRGEN GQSGHYSGFYNETADALAAATYLENLPGIDRNRFFIAGHSNGGTLTLLAAMSRKFRAAAPISAGVNSWRYFNRYSDEICF DETDEREFIMRSSVCFGPSLKCPALLLRGTEERPFDADHQLFVDRALTSGFKIDKKLLPGTHNGVVPHAVEESIRLFNAF V >Mature_320_residues PDKRFLSSAFGQEESGTSIPSLTRRSLLAGAMGLSAAAFLPPRAKAGIVAPEVLPLERQDYAEARKRFHTHLLRKMAAPE KSSVLGTPPGAERVTYPGGPDGSIELVAWLSHYQPSKTLKPAVLFLHGGNATGDGHWALMKPYWEAGYVVLLPSFRGENG QSGHYSGFYNETADALAAATYLENLPGIDRNRFFIAGHSNGGTLTLLAAMSRKFRAAAPISAGVNSWRYFNRYSDEICFD ETDEREFIMRSSVCFGPSLKCPALLLRGTEERPFDADHQLFVDRALTSGFKIDKKLLPGTHNGVVPHAVEESIRLFNAFV
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35131; Mature: 35000
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKRFLSSAFGQEESGTSIPSLTRRSLLAGAMGLSAAAFLPPRAKAGIVAPEVLPLERQ CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHH DYAEARKRFHTHLLRKMAAPEKSSVLGTPPGAERVTYPGGPDGSIELVAWLSHYQPSKTL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHHCCCCCCC KPAVLFLHGGNATGDGHWALMKPYWEAGYVVLLPSFRGENGQSGHYSGFYNETADALAAA CEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH TYLENLPGIDRNRFFIAGHSNGGTLTLLAAMSRKFRAAAPISAGVNSWRYFNRYSDEICF HHHHHCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCCC DETDEREFIMRSSVCFGPSLKCPALLLRGTEERPFDADHQLFVDRALTSGFKIDKKLLPG CCCCCHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHCCCEECHHHCCC THNGVVPHAVEESIRLFNAFV CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PDKRFLSSAFGQEESGTSIPSLTRRSLLAGAMGLSAAAFLPPRAKAGIVAPEVLPLERQ CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHH DYAEARKRFHTHLLRKMAAPEKSSVLGTPPGAERVTYPGGPDGSIELVAWLSHYQPSKTL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHHCCCCCCC KPAVLFLHGGNATGDGHWALMKPYWEAGYVVLLPSFRGENGQSGHYSGFYNETADALAAA CEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH TYLENLPGIDRNRFFIAGHSNGGTLTLLAAMSRKFRAAAPISAGVNSWRYFNRYSDEICF HHHHHCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCCC DETDEREFIMRSSVCFGPSLKCPALLLRGTEERPFDADHQLFVDRALTSGFKIDKKLLPG CCCCCHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHCCCEECHHHCCC THNGVVPHAVEESIRLFNAFV CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA