Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888174

Identifier: 15888174

GI number: 15888174

Start: 832683

End: 833480

Strand: Reverse

Name: 15888174

Synonym: Atu8139

Alternate gene names: NA

Gene position: 833480-832683 (Counterclockwise)

Preceding gene: 15888177

Following gene: 159185430

Centisome position: 29.33

GC content: 61.9

Gene sequence:

>798_bases
ATGTCGTTGATACCGCAACTGATTTTTCGATGCACGGGGCTATCAGTGAAATTTGCGAAACGTCTGCTGCTGGCGATTGC
CGTTATCTATCTGCTGCCCGCGCTGGCATCGGCCGGTCTATGGGCCATGAAGGACCATCCGCGCGGCTGGAACGCCGCCA
GATGGTCGTCCTCTGGCATGCTGCCGCCAGCGTCGAGCGACGGGCAAGCCGCCATCTACGTCTTTTCCGCCATGACCGGC
GGCTTCAAGGGGTCCGTCGCCAGCCATGCCTGGGTCGTGCTGAAGAAGCCTGGTGCCACCGCCTATGACCGGTATGACAA
GGTGGGCTGGGGCACGCCGATCCGCCATAACGGGTATGCGGCTGACGCTTATTGGTATTCCAACACGCCGCGTCAGGTGG
TGGCCATTCACGGCGCGGCGGCGGAAAAGCTCATCCCGAAAATCGAAAAAGCAATCGCCGACTATCCCTATGGCAAGCCG
GGTGGTTATCGCATCTATCCCGGCCCCAACTCCAACACCTTCGTTGCCCATGTGCTGCGCAGCGTGCCGGAACTGGGCGT
CGTGCTGCCGCCGGATGCGGTCGGCCGCGACTATCTGCCGGACGGCGCGTTTTACCACATTGCCGATGACTGGAAGGATG
CAAGCGTCTCCCTTGGCGGGCTGTTCGGCGTTTCGGCCGGCGCGCGCAGCGGTTTCGAGGTCAATTTCCTCGGTCTCGTC
GCCGGCATCGATTTCGTCCAGCCGGGAATTAAGATACCGGGGCTCGGTTATTTCGGCGTCGCGGGAATCCGGGCGTAA

Upstream 100 bases:

>100_bases
CACGGCAAGACCCTGATGGCGGCTTTCCACGAGATTGCCGCGGGTCACTTCGACGGTAACGGAATTGTTCATTCTCTCAG
CCTCAAAAAATTCTGATTTT

Downstream 100 bases:

>100_bases
GCCATTACGTTTCGCTGGCCTGAGCGGCGCGCCGGGCGCGGATGCTCTGGGCAATGAAGACCCGCGACAGGCCGTGATAA
AGCGGCTCCCGCGAGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSLIPQLIFRCTGLSVKFAKRLLLAIAVIYLLPALASAGLWAMKDHPRGWNAARWSSSGMLPPASSDGQAAIYVFSAMTG
GFKGSVASHAWVVLKKPGATAYDRYDKVGWGTPIRHNGYAADAYWYSNTPRQVVAIHGAAAEKLIPKIEKAIADYPYGKP
GGYRIYPGPNSNTFVAHVLRSVPELGVVLPPDAVGRDYLPDGAFYHIADDWKDASVSLGGLFGVSAGARSGFEVNFLGLV
AGIDFVQPGIKIPGLGYFGVAGIRA

Sequences:

>Translated_265_residues
MSLIPQLIFRCTGLSVKFAKRLLLAIAVIYLLPALASAGLWAMKDHPRGWNAARWSSSGMLPPASSDGQAAIYVFSAMTG
GFKGSVASHAWVVLKKPGATAYDRYDKVGWGTPIRHNGYAADAYWYSNTPRQVVAIHGAAAEKLIPKIEKAIADYPYGKP
GGYRIYPGPNSNTFVAHVLRSVPELGVVLPPDAVGRDYLPDGAFYHIADDWKDASVSLGGLFGVSAGARSGFEVNFLGLV
AGIDFVQPGIKIPGLGYFGVAGIRA
>Mature_264_residues
SLIPQLIFRCTGLSVKFAKRLLLAIAVIYLLPALASAGLWAMKDHPRGWNAARWSSSGMLPPASSDGQAAIYVFSAMTGG
FKGSVASHAWVVLKKPGATAYDRYDKVGWGTPIRHNGYAADAYWYSNTPRQVVAIHGAAAEKLIPKIEKAIADYPYGKPG
GYRIYPGPNSNTFVAHVLRSVPELGVVLPPDAVGRDYLPDGAFYHIADDWKDASVSLGGLFGVSAGARSGFEVNFLGLVA
GIDFVQPGIKIPGLGYFGVAGIRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28212; Mature: 28081

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIPQLIFRCTGLSVKFAKRLLLAIAVIYLLPALASAGLWAMKDHPRGWNAARWSSSGM
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
LPPASSDGQAAIYVFSAMTGGFKGSVASHAWVVLKKPGATAYDRYDKVGWGTPIRHNGYA
CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCEE
ADAYWYSNTPRQVVAIHGAAAEKLIPKIEKAIADYPYGKPGGYRIYPGPNSNTFVAHVLR
EEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH
SVPELGVVLPPDAVGRDYLPDGAFYHIADDWKDASVSLGGLFGVSAGARSGFEVNFLGLV
HCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCEEECCCCCCCCCEEEEHHHH
AGIDFVQPGIKIPGLGYFGVAGIRA
HHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLIPQLIFRCTGLSVKFAKRLLLAIAVIYLLPALASAGLWAMKDHPRGWNAARWSSSGM
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
LPPASSDGQAAIYVFSAMTGGFKGSVASHAWVVLKKPGATAYDRYDKVGWGTPIRHNGYA
CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCEE
ADAYWYSNTPRQVVAIHGAAAEKLIPKIEKAIADYPYGKPGGYRIYPGPNSNTFVAHVLR
EEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH
SVPELGVVLPPDAVGRDYLPDGAFYHIADDWKDASVSLGGLFGVSAGARSGFEVNFLGLV
HCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCEEECCCCCCCCCEEEEHHHH
AGIDFVQPGIKIPGLGYFGVAGIRA
HHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA