Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888167
Identifier: 15888167
GI number: 15888167
Start: 826018
End: 826254
Strand: Reverse
Name: 15888167
Synonym: Atu0827
Alternate gene names: NA
Gene position: 826254-826018 (Counterclockwise)
Preceding gene: 159185430
Following gene: 15888166
Centisome position: 29.08
GC content: 60.34
Gene sequence:
>237_bases ATGCCAATGGTGACAGTATCGATTTCCCCGGAACAGGCAGCAAGAATGCGCGAAGCCGTGAACTGCGGGGCTTATGCTTC CGGCAGCGAGGTTGTGAGGGAAGCGCTGAGATTATGGGCGGCATCGGCCGCACATGGCACAGGCGCAAAGTCCACACAAC CCGTCGAAGCGGACCGGGAACGTCTGAACGTGGCGGAACTTTATGCCGCGCATAGCGGGCATATCCGCCGGGCATGA
Upstream 100 bases:
>100_bases GCGCCAGACGAAAACATAAGAACGCCCGCACATAGACCGTAATGGCAGCCTTCTCAAAAAGTTTGCCGGAATTCTAAACG ACGGTTAAGGGAGTGATATC
Downstream 100 bases:
>100_bases GACCCGGCACTGCGGCCCTATGTAATTGCACGGGGCCGTTACAAAACCTTCATTAAAGCTTCACAGTCGTGAAAGCTTTT GTTGACCTGTAATCTGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRERLNVAELYAAHSGHIRRA
Sequences:
>Translated_78_residues MPMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRERLNVAELYAAHSGHIRRA >Mature_77_residues PMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRERLNVAELYAAHSGHIRRA
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8319; Mature: 8188
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRE CCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH RLNVAELYAAHSGHIRRA HHHHHHHHHHCCCCCCCC >Mature Secondary Structure PMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRE CEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH RLNVAELYAAHSGHIRRA HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA