Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15888167

Identifier: 15888167

GI number: 15888167

Start: 826018

End: 826254

Strand: Reverse

Name: 15888167

Synonym: Atu0827

Alternate gene names: NA

Gene position: 826254-826018 (Counterclockwise)

Preceding gene: 159185430

Following gene: 15888166

Centisome position: 29.08

GC content: 60.34

Gene sequence:

>237_bases
ATGCCAATGGTGACAGTATCGATTTCCCCGGAACAGGCAGCAAGAATGCGCGAAGCCGTGAACTGCGGGGCTTATGCTTC
CGGCAGCGAGGTTGTGAGGGAAGCGCTGAGATTATGGGCGGCATCGGCCGCACATGGCACAGGCGCAAAGTCCACACAAC
CCGTCGAAGCGGACCGGGAACGTCTGAACGTGGCGGAACTTTATGCCGCGCATAGCGGGCATATCCGCCGGGCATGA

Upstream 100 bases:

>100_bases
GCGCCAGACGAAAACATAAGAACGCCCGCACATAGACCGTAATGGCAGCCTTCTCAAAAAGTTTGCCGGAATTCTAAACG
ACGGTTAAGGGAGTGATATC

Downstream 100 bases:

>100_bases
GACCCGGCACTGCGGCCCTATGTAATTGCACGGGGCCGTTACAAAACCTTCATTAAAGCTTCACAGTCGTGAAAGCTTTT
GTTGACCTGTAATCTGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MPMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRERLNVAELYAAHSGHIRRA

Sequences:

>Translated_78_residues
MPMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRERLNVAELYAAHSGHIRRA
>Mature_77_residues
PMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRERLNVAELYAAHSGHIRRA

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8319; Mature: 8188

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRE
CCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RLNVAELYAAHSGHIRRA
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PMVTVSISPEQAARMREAVNCGAYASGSEVVREALRLWAASAAHGTGAKSTQPVEADRE
CEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RLNVAELYAAHSGHIRRA
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA