Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is catE [H]

Identifier: 15888145

GI number: 15888145

Start: 800273

End: 801244

Strand: Reverse

Name: catE [H]

Synonym: Atu0802

Alternate gene names: 15888145

Gene position: 801244-800273 (Counterclockwise)

Preceding gene: 159184471

Following gene: 15888141

Centisome position: 28.2

GC content: 61.42

Gene sequence:

>972_bases
ATGCAATTTACCCGCCGCCATACGTTGAAATTTGCCGGAATTTCCTGTGCCGCCACCGCTCTTGCCGGTGCGCTCAAAGC
AGAAGGGGGTGCAGCCCCCGCAAATGCCGCCCTGCCCTTCGCCTTAACGACACCGATACATGTGGGTCAGGCGGCGCTGC
GCGTCCGCGATCTCGATCAGATGATCGATTATTACCGCTCAGTACTCGGCATGAACGAGGTGGAACGCACGGCAAGGGGC
GTGACGCTCGGTGTCGGCGCCGTGCCGCTGCTCGATCTCGTACACAAGCCGGCGGCAGATTTCGAAAGCCCAACCTCCGC
CGGCCTGTTCCACATCGCCTATCTGATGCCCTCTCGCAAGGATCTGGCCCGCTGGCTGGTGCATGCGGCGCTGAAGCAGG
TGCCTCTGTCAGGTTTTGCCGATCACAATGTCAGCGAGGCGATCTATCTCAATGATCCCGAAGGCAACGGTATCGAGGTT
TACAGCGACCGGCCGAAAGATACATGGGTCTGGAGCGGCAACGTGGTGAAGATGGGCACCGAACCACTCGACGTCGATGA
TCTCGTGACGCTGACCGATACCAGAAAAAGCGATTATGAGGCAGCCCCGGCCGGCATGCGCATTGGCCACATACACCTGC
GGGTCGGCGAAATCGCCACCGCCCGCGCCTTTTACGAATCGGCCGTCGGCCTGCGACCGACGCAGGATGCGCGCTCGGAC
GCCTCTTTCCTCTCCTCCGGCGGCTATCATCACCATCTAGCGGTGAATAGCTGGAGCAGCCGTGGTGCGAAGGAACGCAA
CGCCATGGAAACCGGTCTCGACTGGTTTTCACTCGCCGTTCGCAATCCCGCCGATCTCGAGGCGCAGAAAACACGGCTGC
GGGCCGCCGGTTACGTGCTGGTGGAGATGGAGAATAATGTCGTGGAAGCGATCGATCCCTGGGGCACGCGGCTGCGGCTT
GTGCCGGGGTGA

Upstream 100 bases:

>100_bases
ATTGCCGCAAAGGCCAAATACGGCATGATTGACGCATTCGTGTAGTGCGCTGAAACGGAGTGTTGCCTAAGCCATTCAAA
TCGCTGCAAAGAGATTATTC

Downstream 100 bases:

>100_bases
GGTTTGAGGCTTAAATTTTGCGACGAATAGATGCCGAGAACGCCTGCGCCACATGGTTCGAATTCCGCAAAGCAAAGCAT
CCGCATTCCCTCATTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQFTRRHTLKFAGISCAATALAGALKAEGGAAPANAALPFALTTPIHVGQAALRVRDLDQMIDYYRSVLGMNEVERTARG
VTLGVGAVPLLDLVHKPAADFESPTSAGLFHIAYLMPSRKDLARWLVHAALKQVPLSGFADHNVSEAIYLNDPEGNGIEV
YSDRPKDTWVWSGNVVKMGTEPLDVDDLVTLTDTRKSDYEAAPAGMRIGHIHLRVGEIATARAFYESAVGLRPTQDARSD
ASFLSSGGYHHHLAVNSWSSRGAKERNAMETGLDWFSLAVRNPADLEAQKTRLRAAGYVLVEMENNVVEAIDPWGTRLRL
VPG

Sequences:

>Translated_323_residues
MQFTRRHTLKFAGISCAATALAGALKAEGGAAPANAALPFALTTPIHVGQAALRVRDLDQMIDYYRSVLGMNEVERTARG
VTLGVGAVPLLDLVHKPAADFESPTSAGLFHIAYLMPSRKDLARWLVHAALKQVPLSGFADHNVSEAIYLNDPEGNGIEV
YSDRPKDTWVWSGNVVKMGTEPLDVDDLVTLTDTRKSDYEAAPAGMRIGHIHLRVGEIATARAFYESAVGLRPTQDARSD
ASFLSSGGYHHHLAVNSWSSRGAKERNAMETGLDWFSLAVRNPADLEAQKTRLRAAGYVLVEMENNVVEAIDPWGTRLRL
VPG
>Mature_323_residues
MQFTRRHTLKFAGISCAATALAGALKAEGGAAPANAALPFALTTPIHVGQAALRVRDLDQMIDYYRSVLGMNEVERTARG
VTLGVGAVPLLDLVHKPAADFESPTSAGLFHIAYLMPSRKDLARWLVHAALKQVPLSGFADHNVSEAIYLNDPEGNGIEV
YSDRPKDTWVWSGNVVKMGTEPLDVDDLVTLTDTRKSDYEAAPAGMRIGHIHLRVGEIATARAFYESAVGLRPTQDARSD
ASFLSSGGYHHHLAVNSWSSRGAKERNAMETGLDWFSLAVRNPADLEAQKTRLRAAGYVLVEMENNVVEAIDPWGTRLRL
VPG

Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2514

COG function: function code R; Predicted ring-cleavage extradiol dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR000486 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: =1.13.11.2 [H]

Molecular weight: Translated: 35067; Mature: 35067

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTRRHTLKFAGISCAATALAGALKAEGGAAPANAALPFALTTPIHVGQAALRVRDLDQ
CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
MIDYYRSVLGMNEVERTARGVTLGVGAVPLLDLVHKPAADFESPTSAGLFHIAYLMPSRK
HHHHHHHHHCHHHHHHHHCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHH
DLARWLVHAALKQVPLSGFADHNVSEAIYLNDPEGNGIEVYSDRPKDTWVWSGNVVKMGT
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCEEEECC
EPLDVDDLVTLTDTRKSDYEAAPAGMRIGHIHLRVGEIATARAFYESAVGLRPTQDARSD
CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHH
ASFLSSGGYHHHLAVNSWSSRGAKERNAMETGLDWFSLAVRNPADLEAQKTRLRAAGYVL
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCEEE
VEMENNVVEAIDPWGTRLRLVPG
EEECCCEEECCCCCCCEEEECCC
>Mature Secondary Structure
MQFTRRHTLKFAGISCAATALAGALKAEGGAAPANAALPFALTTPIHVGQAALRVRDLDQ
CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
MIDYYRSVLGMNEVERTARGVTLGVGAVPLLDLVHKPAADFESPTSAGLFHIAYLMPSRK
HHHHHHHHHCHHHHHHHHCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHH
DLARWLVHAALKQVPLSGFADHNVSEAIYLNDPEGNGIEVYSDRPKDTWVWSGNVVKMGT
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCEEEECC
EPLDVDDLVTLTDTRKSDYEAAPAGMRIGHIHLRVGEIATARAFYESAVGLRPTQDARSD
CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHH
ASFLSSGGYHHHLAVNSWSSRGAKERNAMETGLDWFSLAVRNPADLEAQKTRLRAAGYVL
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCEEE
VEMENNVVEAIDPWGTRLRLVPG
EEECCCEEECCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]