Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is corA [H]
Identifier: 15888054
GI number: 15888054
Start: 710699
End: 711727
Strand: Direct
Name: corA [H]
Synonym: Atu0710
Alternate gene names: 15888054
Gene position: 710699-711727 (Clockwise)
Preceding gene: 159184430
Following gene: 15888055
Centisome position: 25.01
GC content: 57.14
Gene sequence:
>1029_bases ATGTTAAGCAGCATTGCGGCTGATGCCTGCGATGTGGAGCGGAGAAACGGATTGATAAAAGCCTATCGCGCCAATTGCGA GGCGATCAGCCTGTCGACAGACGACGGCTCCGGACCGATTCCCGACGACATCGTCTGGATCGATCTCGTCAATCCCGACA GGGCGGAAGAGCAGCGTGTGGAAAAGCTGCTGGGCGTTGAACTGCCGACGCGCGAAGACCTCAAGGATATCGAGCCTTCC AGCCGCCTCTATATGGAAGACGGCAATGTCTTCATGACCGCTTCTCTGGTGTGGAAGGCGGATTCGGACGATCCGCGCCT GACCGATATCGCCTTCATTCTGATCGGCAAGCGTCTGGTGACGATCCGTTATGCCGAGCCGAAATCATTCCATCTTTTCA TCGCCGCCATCACCCGCGCGCCGCACGAGATGCGCAGCGGCACGGCGCTGCTGTTGAAACTGCTGGAAACCATCGTCGAC CGGACCGCGGAAATTCTCGAAAATTCAGTTACGGGCATCGACAATCTCGCCGCCGACATTCTCGGCAGTCAGGCGCGCAG CAAGCGCAAGGCACCCCGTTATCTCGAAGATCGCCTGACCAACATCGCCGCCTATCACCGGCTGATCTCGAAGCTTCGCG TCAGCCTCGCATCGCTGGCGCGGCTGCAGACCTTCCTGTCCACCAGCGACCAAGCGCGCGAGGACAAGGGGGCAAAGGAA CAGGGTAAGTCTGTCGGGCGCGATATACAATCGCTGAACGAACATGCCTCCTTCGTTTCCGGCAATCTGACATTTCTGCT CGACGCCTCTCTCGGCATCATCAACATCGAGCAGAACGGCATCATCAAGATTTTCTCGATCGCTTCGGTGGTGTTTTTGC CGCCAACGTTGGTGGCTTCGGTTTATGGAATGAACTTTCAGCTCATGCCGGAGTTGAACTGGACATTTGGTTATCCCCTT GCGCTGGTCGTCATGCTGATGTCCGCCATCATCCCGTTTCTCTTTTTCCGCTGGAAGGGCTGGCTCTGA
Upstream 100 bases:
>100_bases GTTTGGCTCTTGGTCCGTCGGGCTGGTGGGATAGTCTGTCCTGCGCGTTCCGGAGTACTCTCGAAGTGTCGTCCAGAGGT TTGCCGACCGCAAACAGGAT
Downstream 100 bases:
>100_bases AGAGCCAGGATCATCATGTCTCAAATCGCAGACAAGGACGTTGCCGAGAAACCGGATGCCGATGACTCGCACAAGAACAA GGGGCTTTATGCTGCCATCC
Product: magnesium/cobalt transport protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MLSSIAADACDVERRNGLIKAYRANCEAISLSTDDGSGPIPDDIVWIDLVNPDRAEEQRVEKLLGVELPTREDLKDIEPS SRLYMEDGNVFMTASLVWKADSDDPRLTDIAFILIGKRLVTIRYAEPKSFHLFIAAITRAPHEMRSGTALLLKLLETIVD RTAEILENSVTGIDNLAADILGSQARSKRKAPRYLEDRLTNIAAYHRLISKLRVSLASLARLQTFLSTSDQAREDKGAKE QGKSVGRDIQSLNEHASFVSGNLTFLLDASLGIINIEQNGIIKIFSIASVVFLPPTLVASVYGMNFQLMPELNWTFGYPL ALVVMLMSAIIPFLFFRWKGWL
Sequences:
>Translated_342_residues MLSSIAADACDVERRNGLIKAYRANCEAISLSTDDGSGPIPDDIVWIDLVNPDRAEEQRVEKLLGVELPTREDLKDIEPS SRLYMEDGNVFMTASLVWKADSDDPRLTDIAFILIGKRLVTIRYAEPKSFHLFIAAITRAPHEMRSGTALLLKLLETIVD RTAEILENSVTGIDNLAADILGSQARSKRKAPRYLEDRLTNIAAYHRLISKLRVSLASLARLQTFLSTSDQAREDKGAKE QGKSVGRDIQSLNEHASFVSGNLTFLLDASLGIINIEQNGIIKIFSIASVVFLPPTLVASVYGMNFQLMPELNWTFGYPL ALVVMLMSAIIPFLFFRWKGWL >Mature_342_residues MLSSIAADACDVERRNGLIKAYRANCEAISLSTDDGSGPIPDDIVWIDLVNPDRAEEQRVEKLLGVELPTREDLKDIEPS SRLYMEDGNVFMTASLVWKADSDDPRLTDIAFILIGKRLVTIRYAEPKSFHLFIAAITRAPHEMRSGTALLLKLLETIVD RTAEILENSVTGIDNLAADILGSQARSKRKAPRYLEDRLTNIAAYHRLISKLRVSLASLARLQTFLSTSDQAREDKGAKE QGKSVGRDIQSLNEHASFVSGNLTFLLDASLGIINIEQNGIIKIFSIASVVFLPPTLVASVYGMNFQLMPELNWTFGYPL ALVVMLMSAIIPFLFFRWKGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=301, Percent_Identity=39.5348837209302, Blast_Score=201, Evalue=6e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38070; Mature: 38070
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSIAADACDVERRNGLIKAYRANCEAISLSTDDGSGPIPDDIVWIDLVNPDRAEEQRV CCCCHHHHHHHHHHHCCHHEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHH EKLLGVELPTREDLKDIEPSSRLYMEDGNVFMTASLVWKADSDDPRLTDIAFILIGKRLV HHHHCCCCCCHHHHHHCCCCCEEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHCCEEE TIRYAEPKSFHLFIAAITRAPHEMRSGTALLLKLLETIVDRTAEILENSVTGIDNLAADI EEEECCCCCEEEEEEEHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGSQARSKRKAPRYLEDRLTNIAAYHRLISKLRVSLASLARLQTFLSTSDQAREDKGAKE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHH QGKSVGRDIQSLNEHASFVSGNLTFLLDASLGIINIEQNGIIKIFSIASVVFLPPTLVAS HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEHHHHHHHHHCCHHHHHH VYGMNFQLMPELNWTFGYPLALVVMLMSAIIPFLFFRWKGWL HHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSSIAADACDVERRNGLIKAYRANCEAISLSTDDGSGPIPDDIVWIDLVNPDRAEEQRV CCCCHHHHHHHHHHHCCHHEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHH EKLLGVELPTREDLKDIEPSSRLYMEDGNVFMTASLVWKADSDDPRLTDIAFILIGKRLV HHHHCCCCCCHHHHHHCCCCCEEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHCCEEE TIRYAEPKSFHLFIAAITRAPHEMRSGTALLLKLLETIVDRTAEILENSVTGIDNLAADI EEEECCCCCEEEEEEEHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGSQARSKRKAPRYLEDRLTNIAAYHRLISKLRVSLASLARLQTFLSTSDQAREDKGAKE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHH QGKSVGRDIQSLNEHASFVSGNLTFLLDASLGIINIEQNGIIKIFSIASVVFLPPTLVAS HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEHHHHHHHHHCCHHHHHH VYGMNFQLMPELNWTFGYPLALVVMLMSAIIPFLFFRWKGWL HHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]