Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887976
Identifier: 15887976
GI number: 15887976
Start: 623826
End: 624122
Strand: Direct
Name: 15887976
Synonym: Atu0635
Alternate gene names: NA
Gene position: 623826-624122 (Clockwise)
Preceding gene: 159184396
Following gene: 15887977
Centisome position: 21.95
GC content: 57.58
Gene sequence:
>297_bases ATGCCTTGTGCGGCAAGGGGCGAATTGCCGCTAGCCATTCAAAAAGATGGGAATTTAGGTCTATCCATGCGTGAACTGAT CCGTACCAACGATGCCGTGCTTCTTTCCTTCGCTGAAAGCCTGATGAAGGACGCCGGCATCCATTGCCTCATAGCTGATC AGGCGATGAGCATTCTGGAGGGATCGCTCGGCCTTTTGCCGCGACGGTTCCTGGTGGAAGAAGATCGCGCCGGTGAGGCC CGCCGCATTCTCGTCGATGCCGGGCTGGGGGACGAGTTGCGCAACGAAGAGGCTTGA
Upstream 100 bases:
>100_bases GGCTTGACGGATGCGAGTTTGTTTTTGCTTTCTTCAAGCGGTATGACGACGCCCAAGGGACAGGACTCCAATTCGAATTT GAACTCGACAATAAAAACTG
Downstream 100 bases:
>100_bases GCGGCGGTGGGCGACGGTATTTCCGAAACGATCGACGCCTTTCACCGGGGTCGGTTTCACATCATCCAGCCGAAGGGCAG GGGGCACCGGGCGGGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPCAARGELPLAIQKDGNLGLSMRELIRTNDAVLLSFAESLMKDAGIHCLIADQAMSILEGSLGLLPRRFLVEEDRAGEA RRILVDAGLGDELRNEEA
Sequences:
>Translated_98_residues MPCAARGELPLAIQKDGNLGLSMRELIRTNDAVLLSFAESLMKDAGIHCLIADQAMSILEGSLGLLPRRFLVEEDRAGEA RRILVDAGLGDELRNEEA >Mature_97_residues PCAARGELPLAIQKDGNLGLSMRELIRTNDAVLLSFAESLMKDAGIHCLIADQAMSILEGSLGLLPRRFLVEEDRAGEAR RILVDAGLGDELRNEEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10632; Mature: 10501
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCAARGELPLAIQKDGNLGLSMRELIRTNDAVLLSFAESLMKDAGIHCLIADQAMSILE CCCCCCCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHH GSLGLLPRRFLVEEDRAGEARRILVDAGLGDELRNEEA HHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure PCAARGELPLAIQKDGNLGLSMRELIRTNDAVLLSFAESLMKDAGIHCLIADQAMSILE CCCCCCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHH GSLGLLPRRFLVEEDRAGEARRILVDAGLGDELRNEEA HHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA