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The map label for this gene is flgF [H]

Identifier: 15887904

GI number: 15887904

Start: 544046

End: 544780

Strand: Reverse

Name: flgF [H]

Synonym: Atu0558

Alternate gene names: 15887904

Gene position: 544780-544046 (Counterclockwise)

Preceding gene: 159184366

Following gene: 15887903

Centisome position: 19.17

GC content: 60.68

Gene sequence:

>735_bases
ATGCAATCCGGACTATATGTCGCCCTGTCCTCGCAGATCGCGCTGGAGCGCCGTCTCACCACCATTTCTGACAATATGGC
GAATGTGAACACGGTCGGCTTCCGCGGCTCCGAGGTAAAATTCGACGAAATGGTCGCCAAGAACCACAATGACATGAATG
CCAAGGTGGCTTTCGTGTCGCAGGGCAACGACTATCTCTCCACACGCCAGGGCGCTTTCGAGCAGACCGGCAATTCCTTC
GATTTCGCCATCAAGGGCGACGCCTGGTTTGCGCTGGATACGCCGGATGGCCAGATCCTGACGCGCGACGGCCGTTTCAC
CATGCGCCCGGACGGCGCATTGATTTCGTCCAGCGGTTATCCCGTCCTCGACGCGGGCGGCGGCCCGATCAGGCTCAATC
CGAATGGCGGCCCGATCACCGTCGGCCTCGACGGCGCCATCAGGCAGAACGACACCATCGCCGCCTCGCTCGGCATCTTC
CAGGCGGATTTTTCAAAGGGCTTCCTGCGTCACCCCAATAGCGGCGTGAAGCCCGTGGCCCAGCCCGTTCCGGTCGTCAA
CAATCATGAGGTCGGCGTCGTTCAGGGTTATCTCGAGCAGTCGAACGTCAACGGCATTTCCCAGATGACGCAGCTCATCC
AGGTCAACCGCGCCTTTGAGAGCATTTCCTCGATGATGCGCGATACCGAATCGACCTTCGGCGAGGGCATCAAGACGCTC
GGCGGCGCGCGTTGA

Upstream 100 bases:

>100_bases
ACCTACGATCCCCTGGCCGTTTTCGGCTCCTCCAGCGGCTACGGCATTTCCCCCGACCTGCTGATTTCCATCAACTCCCT
GAAACTCGGAGGCAAATGAT

Downstream 100 bases:

>100_bases
GGAACTGACGGATGACAATGCCGGAATCCATGCTCTCGGAATCCAAGCTCTCGGGCTGGGCCATTTCGCCGAAGCTCGCC
CAGCTCGCCAGCCTTGCCGG

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVSQGNDYLSTRQGAFEQTGNSF
DFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGYPVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIF
QADFSKGFLRHPNSGVKPVAQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKTL
GGAR

Sequences:

>Translated_244_residues
MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVSQGNDYLSTRQGAFEQTGNSF
DFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGYPVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIF
QADFSKGFLRHPNSGVKPVAQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKTL
GGAR
>Mature_244_residues
MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVSQGNDYLSTRQGAFEQTGNSF
DFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGYPVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIF
QADFSKGFLRHPNSGVKPVAQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKTL
GGAR

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=266, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26136; Mature: 26136

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS
CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEEEEEEE
QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGY
CCCCHHHHCCCHHHHCCCCEEEEEECCEEEEEECCCCCEEEECCEEEECCCCCEEECCCC
PVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIFQADFSKGFLRHPNSGVKPVA
EEEECCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCEEEEHHCCCHHCCCCCCCCCCC
QPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKTL
CCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGAR
CCCC
>Mature Secondary Structure
MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS
CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEEEEEEE
QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGY
CCCCHHHHCCCHHHHCCCCEEEEEECCEEEEEECCCCCEEEECCEEEECCCCCEEECCCC
PVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIFQADFSKGFLRHPNSGVKPVA
EEEECCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCEEEEHHCCCHHCCCCCCCCCCC
QPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKTL
CCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGAR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]