Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887810
Identifier: 15887810
GI number: 15887810
Start: 454247
End: 454615
Strand: Reverse
Name: 15887810
Synonym: Atu0458
Alternate gene names: NA
Gene position: 454615-454247 (Counterclockwise)
Preceding gene: 159184316
Following gene: 159184311
Centisome position: 16.0
GC content: 50.95
Gene sequence:
>369_bases ATGACTGAGAGCCAGACGGAAACACCAGCAGCAAACGAATGGCCGAAGCGCATCATATGGGTAGCAATTATCGCAGGAGC GATATACGCCTACAGCAATTGGGATTCGGTTTCCGTCCAACTTTTTGGTGCAACGGCTTACACCTGCAAAAGCCTAGTGC CCGATGTTGTGAAAATCTCTGCCGAGAACACGAACGCTTTTCAGGTCAAGGTTGTCGGCGTTATCGATCCCAAACAGGTT TCAAAAACTGATACCCGCTTGGAATGCGAAGGCACAGGGATGCTTGCCAACGGTCAGAAAGCCCCGATCAGCTACCGCGC ATACGAAGAGGGCGAACAGTGGTGGGTGGTTTACGAAGCTAAACCTTAA
Upstream 100 bases:
>100_bases CCTGATATCCAAAGCCCAAACCCTCGAAGGCGAAGCCTCCGAGCATCATTGACGTTACGCCGGTCATGATCTACCTAAAT TTAACGTTGGGGGACGCGGA
Downstream 100 bases:
>100_bases TCACTGAATGAACCTTCGAGGTTCGGAGCTAGTGCATTCGAAATCTCGCTGATTGCCGCAGACGCAGCGGCACGCGGATC GACGACCCCTGTTATCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTESQTETPAANEWPKRIIWVAIIAGAIYAYSNWDSVSVQLFGATAYTCKSLVPDVVKISAENTNAFQVKVVGVIDPKQV SKTDTRLECEGTGMLANGQKAPISYRAYEEGEQWWVVYEAKP
Sequences:
>Translated_122_residues MTESQTETPAANEWPKRIIWVAIIAGAIYAYSNWDSVSVQLFGATAYTCKSLVPDVVKISAENTNAFQVKVVGVIDPKQV SKTDTRLECEGTGMLANGQKAPISYRAYEEGEQWWVVYEAKP >Mature_121_residues TESQTETPAANEWPKRIIWVAIIAGAIYAYSNWDSVSVQLFGATAYTCKSLVPDVVKISAENTNAFQVKVVGVIDPKQVS KTDTRLECEGTGMLANGQKAPISYRAYEEGEQWWVVYEAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13506; Mature: 13375
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESQTETPAANEWPKRIIWVAIIAGAIYAYSNWDSVSVQLFGATAYTCKSLVPDVVKIS CCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEEECCHHHHHHHCCCCEEEEE AENTNAFQVKVVGVIDPKQVSKTDTRLECEGTGMLANGQKAPISYRAYEEGEQWWVVYEA CCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCCEEEEEECCCCEEEEEEEE KP CC >Mature Secondary Structure TESQTETPAANEWPKRIIWVAIIAGAIYAYSNWDSVSVQLFGATAYTCKSLVPDVVKIS CCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEEECCHHHHHHHCCCCEEEEE AENTNAFQVKVVGVIDPKQVSKTDTRLECEGTGMLANGQKAPISYRAYEEGEQWWVVYEA CCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCCEEEEEECCCCEEEEEEEE KP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA