Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887791

Identifier: 15887791

GI number: 15887791

Start: 438416

End: 439111

Strand: Reverse

Name: 15887791

Synonym: Atu0443

Alternate gene names: NA

Gene position: 439111-438416 (Counterclockwise)

Preceding gene: 159184311

Following gene: 159185426

Centisome position: 15.45

GC content: 55.17

Gene sequence:

>696_bases
ATGGATCACATCGAACTTAGAAAAAAAATTGGCCAAGCCATTAGAACCGCACGTATTCGGCGCGGCTTGGTTATGCGCGA
TCTAGCCGAAGCGGGTGGCGTCAGCACTGGCGCAGTCGGCAACTGGGAACGCGGCGCGAATGCTATTGCCATGGAGCATC
TGCAAGCCATCTCGCAAAAGCTGCGAATCGATCCTGTTGCGCTCAGCAACGGTTCGCTGCGGTATCTTGATGAAGAGGAA
GCCCTCGCCGACGCCGAACAGGTCACAGATTTCGGACCTGCGCCGACAGGCCCTATGGACGTTGAGGTCTTGGGGGTAGC
TGTCGGCGGAGATGACGGAGATTTCACCTTGAACGGCGAAGTGTCCGGGTATGTTCGAAGACCCCCAGGAATTGCGCATC
TTAGGAAAGTCTTCGCACTCCACGTACTCAGTGACAGCATGATTCCAAGATACGACCCCGGCGAACTCATCTATGTCGGC
GGGCGCGAGGCTGTAGCAGGGGATCACGTGGTTATTGAAATGTTCCCAGACGAGGGCGCGACAGTCGGCAAGGCATATGT
GAAGAAGCTCAAAGGGCGGACGAAGGGCGCTATAGTCTGCGAACAATACAATCCGCCAAAGGAACTACAGTTTGACCAGT
ATGCCATCAAGAACATGTGGCGCATCATCCCGCTTCGCGAACTGCTTGGCTATTAA

Upstream 100 bases:

>100_bases
GAGGTTCGTTTCCATGAGCGCGATTAAAAGCACAGCTTTAAAATCGATGCAAGCTATACTTAAATGGACGAAAGATGAAA
GTTCCCCTTTCATCGCGGCC

Downstream 100 bases:

>100_bases
TGCGCCAAGCCTCCGCCCGGATGCGGTCCGTTTCAAACGAAAATGCTGCTTGGATCGAAATATTTCGGCCATCCGATCCT
TCTGATTGGCAGGCTGAGCA

Product: putative phage repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDHIELRKKIGQAIRTARIRRGLVMRDLAEAGGVSTGAVGNWERGANAIAMEHLQAISQKLRIDPVALSNGSLRYLDEEE
ALADAEQVTDFGPAPTGPMDVEVLGVAVGGDDGDFTLNGEVSGYVRRPPGIAHLRKVFALHVLSDSMIPRYDPGELIYVG
GREAVAGDHVVIEMFPDEGATVGKAYVKKLKGRTKGAIVCEQYNPPKELQFDQYAIKNMWRIIPLRELLGY

Sequences:

>Translated_231_residues
MDHIELRKKIGQAIRTARIRRGLVMRDLAEAGGVSTGAVGNWERGANAIAMEHLQAISQKLRIDPVALSNGSLRYLDEEE
ALADAEQVTDFGPAPTGPMDVEVLGVAVGGDDGDFTLNGEVSGYVRRPPGIAHLRKVFALHVLSDSMIPRYDPGELIYVG
GREAVAGDHVVIEMFPDEGATVGKAYVKKLKGRTKGAIVCEQYNPPKELQFDQYAIKNMWRIIPLRELLGY
>Mature_231_residues
MDHIELRKKIGQAIRTARIRRGLVMRDLAEAGGVSTGAVGNWERGANAIAMEHLQAISQKLRIDPVALSNGSLRYLDEEE
ALADAEQVTDFGPAPTGPMDVEVLGVAVGGDDGDFTLNGEVSGYVRRPPGIAHLRKVFALHVLSDSMIPRYDPGELIYVG
GREAVAGDHVVIEMFPDEGATVGKAYVKKLKGRTKGAIVCEQYNPPKELQFDQYAIKNMWRIIPLRELLGY

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25251; Mature: 25251

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHIELRKKIGQAIRTARIRRGLVMRDLAEAGGVSTGAVGNWERGANAIAMEHLQAISQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRIDPVALSNGSLRYLDEEEALADAEQVTDFGPAPTGPMDVEVLGVAVGGDDGDFTLNGE
HCCCEEEECCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEECCC
VSGYVRRPPGIAHLRKVFALHVLSDSMIPRYDPGELIYVGGREAVAGDHVVIEMFPDEGA
CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCC
TVGKAYVKKLKGRTKGAIVCEQYNPPKELQFDQYAIKNMWRIIPLRELLGY
HHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MDHIELRKKIGQAIRTARIRRGLVMRDLAEAGGVSTGAVGNWERGANAIAMEHLQAISQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRIDPVALSNGSLRYLDEEEALADAEQVTDFGPAPTGPMDVEVLGVAVGGDDGDFTLNGE
HCCCEEEECCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEECCC
VSGYVRRPPGIAHLRKVFALHVLSDSMIPRYDPGELIYVGGREAVAGDHVVIEMFPDEGA
CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCC
TVGKAYVKKLKGRTKGAIVCEQYNPPKELQFDQYAIKNMWRIIPLRELLGY
HHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA