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The map label for this gene is rbsK [H]

Identifier: 15887715

GI number: 15887715

Start: 358549

End: 359448

Strand: Reverse

Name: rbsK [H]

Synonym: Atu0364

Alternate gene names: 15887715

Gene position: 359448-358549 (Counterclockwise)

Preceding gene: 15887716

Following gene: 15887686

Centisome position: 12.65

GC content: 61.67

Gene sequence:

>900_bases
ATGATTACTGTTTTCGGCTCCATCAACATGGACCTCGTCGCCACCGCCAAACGCCTGCCCAAGCCCGGTGAAACCGTGAC
CGGAGACACCTTCTCCACGGCCGCCGGCGGCAAGGGAGCCAATCAGGCGCTGGCCGCACGGCGTGCAGGTGTTACGGTGA
AGATGGCCGGCGCTACGGGTGATGATACCTTTGCCGCGCCGGCGCTGACCTTGCTGCGCGACGCGGGTACCGATCTGTCA
TTGGTGAAAACCGCGCCCGGCCCGACGGGAACGGCAGTGATCCTCATCGGTGAAGGCGGAGAGAACATGATCTCGGTCAT
TCCCGCAGCAAATGGCGAAGTCTCCGCATTCGACGCGACAAAGGTCGTGGGCGAGATGGACGCAGGCGATATTCTGATGC
TGCAGTTCGAAATACCGGCTGCAGCCATCGAAGCGGCGCTGACGGCTGCAAAGGCAAAGCGCATCACCACCGTCATCAAT
ACCGCACCGCTGACTGCAGATGGTCCCCGCCTTGCCGGCCTTGCCGATATCGTCATCGCCAACGAAACCGAGTTTGAGTT
GCTGATCGGCAAGAACGGCCTCTCCAGTGGCGAACGAGAGAGCGAACTCAAGGCCCTTCACGACAGGACCGGCCAGACTT
TGATCGTCACGCTTGGTGCAGATGGCGTGATCGCCATGCGCAACGGCAAGGTTTTCAGTGCTTCCGGCCTGAAGATCGAG
CCGGTCGACACGGTTGGTGCGGGCGATACCTTCTGTGGTTATCTTGCCGCCAGCCTTGATCAGGGAATGGATTTCGAAAA
GGCGCTGAAGCGCGCCGCCGTTGCAGGTTCACTCGCCTGCACGCGCGCCGGCGCCCAGCCTTCCATTCCGCAGGCAGCGG
AAGTGGATGCGGCGCTCTGA

Upstream 100 bases:

>100_bases
AAACCGAGCCGGCGCGGCCAAATTGCGGGTAGTTGACGACGAGTGATCGTCTCGGGCAAAGTCGCCGCCTTGCTCAAATT
TCATACGGACCCAGCGCCCC

Downstream 100 bases:

>100_bases
GGGATCAGGCTGCCGGCGCATTTTCCGGGCGTAAAACCGCTACGCAGTTTTACCGGAAATGCTTTAGCGACGGATGAAGG
TGAGATAGGCCGAGCTGCGG

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MITVFGSINMDLVATAKRLPKPGETVTGDTFSTAAGGKGANQALAARRAGVTVKMAGATGDDTFAAPALTLLRDAGTDLS
LVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSAFDATKVVGEMDAGDILMLQFEIPAAAIEAALTAAKAKRITTVIN
TAPLTADGPRLAGLADIVIANETEFELLIGKNGLSSGERESELKALHDRTGQTLIVTLGADGVIAMRNGKVFSASGLKIE
PVDTVGAGDTFCGYLAASLDQGMDFEKALKRAAVAGSLACTRAGAQPSIPQAAEVDAAL

Sequences:

>Translated_299_residues
MITVFGSINMDLVATAKRLPKPGETVTGDTFSTAAGGKGANQALAARRAGVTVKMAGATGDDTFAAPALTLLRDAGTDLS
LVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSAFDATKVVGEMDAGDILMLQFEIPAAAIEAALTAAKAKRITTVIN
TAPLTADGPRLAGLADIVIANETEFELLIGKNGLSSGERESELKALHDRTGQTLIVTLGADGVIAMRNGKVFSASGLKIE
PVDTVGAGDTFCGYLAASLDQGMDFEKALKRAAVAGSLACTRAGAQPSIPQAAEVDAAL
>Mature_299_residues
MITVFGSINMDLVATAKRLPKPGETVTGDTFSTAAGGKGANQALAARRAGVTVKMAGATGDDTFAAPALTLLRDAGTDLS
LVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSAFDATKVVGEMDAGDILMLQFEIPAAAIEAALTAAKAKRITTVIN
TAPLTADGPRLAGLADIVIANETEFELLIGKNGLSSGERESELKALHDRTGQTLIVTLGADGVIAMRNGKVFSASGLKIE
PVDTVGAGDTFCGYLAASLDQGMDFEKALKRAAVAGSLACTRAGAQPSIPQAAEVDAAL

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=302, Percent_Identity=33.112582781457, Blast_Score=138, Evalue=7e-33,
Organism=Escherichia coli, GI1790193, Length=299, Percent_Identity=35.4515050167224, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI87082343, Length=293, Percent_Identity=25.938566552901, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17532905, Length=300, Percent_Identity=36.3333333333333, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6319884, Length=328, Percent_Identity=32.3170731707317, Blast_Score=128, Evalue=1e-30,
Organism=Drosophila melanogaster, GI20128807, Length=302, Percent_Identity=34.4370860927152, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24583886, Length=301, Percent_Identity=26.9102990033223, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 30153; Mature: 30153

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVFGSINMDLVATAKRLPKPGETVTGDTFSTAAGGKGANQALAARRAGVTVKMAGATG
CEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCC
DDTFAAPALTLLRDAGTDLSLVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSAFDAT
CCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEHHH
KVVGEMDAGDILMLQFEIPAAAIEAALTAAKAKRITTVINTAPLTADGPRLAGLADIVIA
HHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEE
NETEFELLIGKNGLSSGERESELKALHDRTGQTLIVTLGADGVIAMRNGKVFSASGLKIE
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCEEEECCCCEEC
PVDTVGAGDTFCGYLAASLDQGMDFEKALKRAAVAGSLACTRAGAQPSIPQAAEVDAAL
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITVFGSINMDLVATAKRLPKPGETVTGDTFSTAAGGKGANQALAARRAGVTVKMAGATG
CEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCC
DDTFAAPALTLLRDAGTDLSLVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSAFDAT
CCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEHHH
KVVGEMDAGDILMLQFEIPAAAIEAALTAAKAKRITTVINTAPLTADGPRLAGLADIVIA
HHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEE
NETEFELLIGKNGLSSGERESELKALHDRTGQTLIVTLGADGVIAMRNGKVFSASGLKIE
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCEEEECCCCEEC
PVDTVGAGDTFCGYLAASLDQGMDFEKALKRAAVAGSLACTRAGAQPSIPQAAEVDAAL
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]