Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887686

Identifier: 15887686

GI number: 15887686

Start: 328265

End: 328972

Strand: Reverse

Name: 15887686

Synonym: Atu0335

Alternate gene names: NA

Gene position: 328972-328265 (Counterclockwise)

Preceding gene: 15887715

Following gene: 159184263

Centisome position: 11.58

GC content: 56.5

Gene sequence:

>708_bases
GTGCGCCTGAATGGCGCCGGGGAAGCATTCGGACCCACTCCTATGCTCGAACGACTCCGTGAACCCGCGCCAGCATTTTC
GCTGCCCAATGACCAGAACGGCGCCTATGACACAGCGCTGCGGCATTCCGCGCGTGTAAAGCGGCTGAAGATCATTCTGC
CGCTCAGCGCGGCCATCATCTCGCTCGCCTTCATCGCCGTTTCGGTCATCCGCACCTGGGCGCCCGAAAAGGTTTCGCTG
GAAAGCGCGCGGATAGAAGACGGCAAGATCGTGATGGAAAAGCCCGCCGTCGCGGGCCGCAACGAAAAGGGTATAGATTA
TTCCATGAACGCCGACCGCGCGTTGCAGGACATCGCCAACCCCAACCTGATGACGCTCGAAAAGGTGCTGGCCGCCGTGC
CTGTCAATGACAGCGTCGCGCAGGTTATCGCCCAGGAAGGCATTTTCGACCGCTCCACCAACACGCTGAAGATGACTGCG
CCTTTTGACATCAATCTCAGCAATGGCATACAAGCGAAGTTCCAGTCTGCGGATGTCGATCTGAAGGCCGGCAAAATGAG
CAGCAAAGAGCCGGTTTCAATCAAAACAAACGACGGCTCCATTGTTGCGCAATCGATTGACATCGCAGATAATGGCAAGA
CAATTACATTTTCGGGGCAGGTACGCGCACGTATCGCTGCATCCAATATCAAGAATGAAGGCAAGTGA

Upstream 100 bases:

>100_bases
TAAAATTCGCATTTCCCTTGCACCTCTCCAGACAAAAACCATATTGGCAGGACAAAGCACTCGTGCCAAACACATTTAGA
TAGAGACACAAGCTTCGATT

Downstream 100 bases:

>100_bases
GAGCCCGGTCCAGATGATGCAAATTTCCCGTCCCGTTTCCCTTGGCAGAACCGCAGGCCTTACAGCCGCAGGTCTCTTTT
TTTCCTGTCTTGCAACTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRLNGAGEAFGPTPMLERLREPAPAFSLPNDQNGAYDTALRHSARVKRLKIILPLSAAIISLAFIAVSVIRTWAPEKVSL
ESARIEDGKIVMEKPAVAGRNEKGIDYSMNADRALQDIANPNLMTLEKVLAAVPVNDSVAQVIAQEGIFDRSTNTLKMTA
PFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKTITFSGQVRARIAASNIKNEGK

Sequences:

>Translated_235_residues
MRLNGAGEAFGPTPMLERLREPAPAFSLPNDQNGAYDTALRHSARVKRLKIILPLSAAIISLAFIAVSVIRTWAPEKVSL
ESARIEDGKIVMEKPAVAGRNEKGIDYSMNADRALQDIANPNLMTLEKVLAAVPVNDSVAQVIAQEGIFDRSTNTLKMTA
PFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKTITFSGQVRARIAASNIKNEGK
>Mature_235_residues
MRLNGAGEAFGPTPMLERLREPAPAFSLPNDQNGAYDTALRHSARVKRLKIILPLSAAIISLAFIAVSVIRTWAPEKVSL
ESARIEDGKIVMEKPAVAGRNEKGIDYSMNADRALQDIANPNLMTLEKVLAAVPVNDSVAQVIAQEGIFDRSTNTLKMTA
PFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKTITFSGQVRARIAASNIKNEGK

Specific function: Unknown

COG id: COG5375

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25215; Mature: 25215

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNGAGEAFGPTPMLERLREPAPAFSLPNDQNGAYDTALRHSARVKRLKIILPLSAAII
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECHHHHHH
SLAFIAVSVIRTWAPEKVSLESARIEDGKIVMEKPAVAGRNEKGIDYSMNADRALQDIAN
HHHHHHHHHHHHCCCCCEEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC
PNLMTLEKVLAAVPVNDSVAQVIAQEGIFDRSTNTLKMTAPFDINLSNGIQAKFQSADVD
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCEEEECCCCE
LKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKTITFSGQVRARIAASNIKNEGK
EECCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEECCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MRLNGAGEAFGPTPMLERLREPAPAFSLPNDQNGAYDTALRHSARVKRLKIILPLSAAII
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECHHHHHH
SLAFIAVSVIRTWAPEKVSLESARIEDGKIVMEKPAVAGRNEKGIDYSMNADRALQDIAN
HHHHHHHHHHHHCCCCCEEHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC
PNLMTLEKVLAAVPVNDSVAQVIAQEGIFDRSTNTLKMTAPFDINLSNGIQAKFQSADVD
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCEEEECCCCE
LKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKTITFSGQVRARIAASNIKNEGK
EECCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEECCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA