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The map label for this gene is phnF [C]

Identifier: 15887536

GI number: 15887536

Start: 185021

End: 185758

Strand: Direct

Name: phnF [C]

Synonym: Atu0182

Alternate gene names: 15887536

Gene position: 185021-185758 (Clockwise)

Preceding gene: 159184191

Following gene: 15887541

Centisome position: 6.51

GC content: 60.84

Gene sequence:

>738_bases
ATGAGCCCTGTAGCAGCGATGAAAAGAAAGAACGGCGTGGCGCTCTGGCGGCAGATCGCCGACCGGATCAGAGGCGAGAT
CGCGGCCGGTGATCACGACGAAACCGGCATGTTGCCGCCGGAGATGACGCTGGCCGAAAAATTCGGCGTCAACCGCCATA
CCGTCCGGAGTGCGATCGCCGCACTGGCGAGCGAAGGCATTCTTGAGCCGATGCAGGGACGGGGCACGATGATCGCCCGC
AAGGAGCGTTTGAGCTTTCCGATTTCGCTGCGCACGCGCTTCACGGCTGGCATCGGCGATCAGGTGAAGGAAATGGAGGC
GCTGCTTCTTTCCCACACGACCGAACCGGCAAGTGCCGATCTCGCAGCCCGGCTGCAATTGCCATCAGGTGCGCCGCTCG
TTCGTCTGGAAACCTTGCGCAAGGCGGACACCCGCCCCGTGTCGCGTTCGACCACATGGTTCCCGGCGGATCGTTTCGCC
GGAATAGGCGAGGCCTATCGGAAAAGCGGCTCGATTACGGCCGCTTTCAAAGCGCTTGGCGTGGCGGACTACGTGCGCAT
TTCCACCGTCATTTCTGCTATCCACGCGGATACGCAGGATTTGGCCGATCTCGAACTATCGCCCGGGGCCATTCTGCTTG
TCACGCAGGCATTGAATGCCGATATGGATGGCGTGCCGGTGCAATATGCCGTCAGCCGATTTTCTGCCGATACGGTCGAA
TTCACGGTGGAGAATTAG

Upstream 100 bases:

>100_bases
CGCAGCTTCGTTATTCATCGCTTGACCTCAAATGTCTATTGATATAGACAACTATACAATATAAGTTACAATTAACGTCG
ATGAATGACAAGCGTGTGAC

Downstream 100 bases:

>100_bases
GGTACGGTTTTATTCCGCCTGCGAAAGGCCGAGCACATCCAGCATGGAATAGAAACCGGGCTTCTTGTCGAAGGCCCAGA
CTGCTGCCGTGATCGCGCCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSPVAAMKRKNGVALWRQIADRIRGEIAAGDHDETGMLPPEMTLAEKFGVNRHTVRSAIAALASEGILEPMQGRGTMIAR
KERLSFPISLRTRFTAGIGDQVKEMEALLLSHTTEPASADLAARLQLPSGAPLVRLETLRKADTRPVSRSTTWFPADRFA
GIGEAYRKSGSITAAFKALGVADYVRISTVISAIHADTQDLADLELSPGAILLVTQALNADMDGVPVQYAVSRFSADTVE
FTVEN

Sequences:

>Translated_245_residues
MSPVAAMKRKNGVALWRQIADRIRGEIAAGDHDETGMLPPEMTLAEKFGVNRHTVRSAIAALASEGILEPMQGRGTMIAR
KERLSFPISLRTRFTAGIGDQVKEMEALLLSHTTEPASADLAARLQLPSGAPLVRLETLRKADTRPVSRSTTWFPADRFA
GIGEAYRKSGSITAAFKALGVADYVRISTVISAIHADTQDLADLELSPGAILLVTQALNADMDGVPVQYAVSRFSADTVE
FTVEN
>Mature_244_residues
SPVAAMKRKNGVALWRQIADRIRGEIAAGDHDETGMLPPEMTLAEKFGVNRHTVRSAIAALASEGILEPMQGRGTMIARK
ERLSFPISLRTRFTAGIGDQVKEMEALLLSHTTEPASADLAARLQLPSGAPLVRLETLRKADTRPVSRSTTWFPADRFAG
IGEAYRKSGSITAAFKALGVADYVRISTVISAIHADTQDLADLELSPGAILLVTQALNADMDGVPVQYAVSRFSADTVEF
TVEN

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. By Similarity Could Be A Transcriptional Regulator. [C]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790540, Length=236, Percent_Identity=28.8135593220339, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786950, Length=148, Percent_Identity=33.7837837837838, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788418, Length=248, Percent_Identity=23.7903225806452, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87082252, Length=244, Percent_Identity=22.5409836065574, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012702
- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 26403; Mature: 26271

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVAAMKRKNGVALWRQIADRIRGEIAAGDHDETGMLPPEMTLAEKFGVNRHTVRSAIA
CCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
ALASEGILEPMQGRGTMIARKERLSFPISLRTRFTAGIGDQVKEMEALLLSHTTEPASAD
HHHHCCCCCCCCCCCCEEEEHHHCCCCEEEHEEECCCCCHHHHHHHHHHHHCCCCCCCCC
LAARLQLPSGAPLVRLETLRKADTRPVSRSTTWFPADRFAGIGEAYRKSGSITAAFKALG
CEEEEECCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHH
VADYVRISTVISAIHADTQDLADLELSPGAILLVTQALNADMDGVPVQYAVSRFSADTVE
HHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHCCCEEE
FTVEN
EEECC
>Mature Secondary Structure 
SPVAAMKRKNGVALWRQIADRIRGEIAAGDHDETGMLPPEMTLAEKFGVNRHTVRSAIA
CCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
ALASEGILEPMQGRGTMIARKERLSFPISLRTRFTAGIGDQVKEMEALLLSHTTEPASAD
HHHHCCCCCCCCCCCCEEEEHHHCCCCEEEHEEECCCCCHHHHHHHHHHHHCCCCCCCCC
LAARLQLPSGAPLVRLETLRKADTRPVSRSTTWFPADRFAGIGEAYRKSGSITAAFKALG
CEEEEECCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHH
VADYVRISTVISAIHADTQDLADLELSPGAILLVTQALNADMDGVPVQYAVSRFSADTVE
HHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHCCCEEE
FTVEN
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431; 9889346 [H]